Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 336 a.a., transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  169 bits (427), Expect = 1e-46
 Identities = 107/324 (33%), Positives = 163/324 (50%), Gaps = 15/324 (4%)

Query: 15  LLLYPGVQRAAVHGLADLFLVANRVAAELGA---VELPHIRVSCWQAD------ETGQLL 65
           LL  PG   ++V    D+F VANR   +      ++  H        D       +GQL+
Sbjct: 6   LLAMPGCMASSVQVALDMFYVANRCLEKRDGSALIDNAHFTAQVVSPDGKAVESASGQLI 65

Query: 66  PASDNSAVTVPGLRVLIIPPSLESAPQAEL---LERHRAPLCLLHGR---GTVLASVCIG 119
                 A       VL+      SA  +E+   L   +     L G    G ++AS C G
Sbjct: 66  QPELAMADAKIADIVLVTSLFAASASHSEVDNYLTAQQEAAAWLKGMSDAGALVASACSG 125

Query: 120 VFFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGL 179
            F +A +G++DGR A THW       +R+PRVR   ++ LL+ G+++      A+TD+ L
Sbjct: 126 TFLLAEAGIMDGREATTHWLLEAVFRRRYPRVRYHGERMLLEYGNVICGGAFFAFTDILL 185

Query: 180 RLLERFLGTTVAQETARYLAVDPVAAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQDAD 239
           +LLER+ G  +A   AR + ++P        + +    H DEA+ K + WL+ +  Q   
Sbjct: 186 KLLERYGGRELALMCARLMLLEPNRELQQPFMQSSGRSHEDEAIRKAEQWLKHHFDQQIS 245

Query: 240 LATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQ 299
           + + A    + AR F RRF+AATG+ P EY Q++RV  A R LE + R   ++ W VGY+
Sbjct: 246 VDSAADAISMGARNFKRRFKAATGVTPIEYLQRLRVDAAKRQLEHSSRASTEVIWSVGYE 305

Query: 300 DPGAFRKVFQRVIGLTPSDYRRRF 323
           D  +FR++F+R  G+T   YRRRF
Sbjct: 306 DASSFRRLFKRQTGVTMEQYRRRF 329