Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 337 a.a., transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  211 bits (537), Expect = 2e-59
 Identities = 123/324 (37%), Positives = 181/324 (55%), Gaps = 28/324 (8%)

Query: 11  LDIGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQADETGQLLPASDN 70
           L + +L  PG   +AV GL ++ LVAN++                  ADE   L  +S +
Sbjct: 17  LKVAILAIPGCLTSAVFGLEEMLLVANKLML----------------ADENNSL--SSSS 58

Query: 71  SAVTVPGL---------RVLIIPPSLESAPQAELLERHRAPLCLLHGRGTVLASVCIGVF 121
            AVT   L         +++IIPPS+E+             L   H +G +L S C G F
Sbjct: 59  FAVTRLSLEEMSLEECYQLVIIPPSIETESYFNAAPSLHLWLQQQHAQGAILCSACAGAF 118

Query: 122 FIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRL 181
            +AA+GLLDGR A THW  V     ++P+V+++ ++ ++++GDI+T+AG+M+W DLGL L
Sbjct: 119 VLAAAGLLDGRRATTHWGLVETFETQYPQVKLDIEKIMVNEGDIITAAGMMSWLDLGLEL 178

Query: 182 LERFLGTTVAQETARYLAVDPVAAPLPG-AVFNPRLDHGDEAVLKVQHWLQGNGGQDADL 240
           + +F    V ++  +YL +D           F P+ DHGD  +L +QH LQ + GQ   +
Sbjct: 179 VAQFCHVKVMRQLGKYLVIDTGGREQRYYQQFLPKRDHGDTVILNLQHRLQTDYGQPTSV 238

Query: 241 ATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQD 300
           A +A    +  RTFLRRF  ATG +P EY Q++R+ +AC LLE +    E IA  VGY+D
Sbjct: 239 AALAQLCCMGERTFLRRFVKATGHKPNEYLQKLRIQKACDLLENSPLNFETIAHQVGYED 298

Query: 301 PGAFRKVFQRVIGLTPSDYRRRFA 324
             A RK F R+ GLTPS +R+RF+
Sbjct: 299 VSACRKAFTRITGLTPSAFRQRFS 322