Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 316 a.a., transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  123 bits (309), Expect = 5e-33
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 22/255 (8%)

Query: 80  VLIIPP--SLESAPQAELLERHRAPLCLLHGRGTVLASVCIGVFFIAASGLLDGRPACTH 137
           +++IP    L+SAP + + E     L   H RG ++  +C G + +A SGLLD + A TH
Sbjct: 70  IVVIPGWHDLDSAPTSNISEA----LVRAHARGAMVVGLCYGAYALAYSGLLDEKEAATH 125

Query: 138 WNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRLLERFLGTTVAQETARY 197
           W        RFP +++      ++   +VTSAG  A  D  L ++  F GT  A + AR 
Sbjct: 126 WMAEDDFTVRFPNIKLNTNALYVESDRVVTSAGTAAALDCCLYIVRSFYGTKTANKVARI 185

Query: 198 LAVDP---------VAAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQDADLATMAACAG 248
           L V P         +A P+P +         D  V ++  +L+ N  +   +A +A    
Sbjct: 186 LVVPPHREGGQAQFIAQPIPKST-------QDAEVNRLLDYLRENLDKQYSIADLADQLF 238

Query: 249 LEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQDPGAFRKVF 308
           +  RTF R F  ATG+   ++    R+ R+  LLE TR +VEQ++  VG+Q   +FRK F
Sbjct: 239 MSRRTFTRHFNNATGMSFGKWLVSTRLQRSLELLESTRLSVEQVSEMVGFQTATSFRKHF 298

Query: 309 QRVIGLTPSDYRRRF 323
            +   ++PS +R+ F
Sbjct: 299 NQRFHVSPSAWRKTF 313