Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 347 a.a., transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  125 bits (315), Expect = 1e-33
 Identities = 77/224 (34%), Positives = 114/224 (50%), Gaps = 2/224 (0%)

Query: 102 PLCLLHGRGTVLASVCIGVFFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLD 161
           PL L    G  LA+ C G   +AASGLLDGR A T W       + F +V +   + ++ 
Sbjct: 106 PLRLFADSGKPLAAYCSGTLILAASGLLDGREATTVWWLNEMFQRHFAKVNLRMDKLVVS 165

Query: 162 DGDIVTSAGLMAWTDLGLRLLERFLGTTVAQETARYLAVDPVAAPLPGAVFNPRL--DHG 219
           DG + T+    +   L L L+   +G  +A + A+ L +DP        +    +   H 
Sbjct: 166 DGHLHTAGATTSNMSLALHLVHILVGEQLASQMAKILLIDPNRQSQQPFMTMDLMTSSHK 225

Query: 220 DEAVLKVQHWLQGNGGQDADLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRAC 279
           DE +  VQ W+Q +  +   L  +A    L  RT +RRF+ A    P  Y Q++RV  A 
Sbjct: 226 DEVIWNVQQWMQHHLTEPLLLDDIADKFALGKRTLIRRFKKALNETPASYVQRLRVDEAK 285

Query: 280 RLLEFTRRTVEQIAWGVGYQDPGAFRKVFQRVIGLTPSDYRRRF 323
           RLLE T   +E++   VGY+D  +FRK+F ++  LTP  YR+RF
Sbjct: 286 RLLETTSLGLEEVVTRVGYEDVSSFRKLFIQLTSLTPRAYRQRF 329