Pairwise Alignments

Query, 971 a.a., putative K(+)/H(+) antiporter subunit A/B from Pseudomonas putida KT2440

Subject, 665 a.a., NAD(P)H-quinone oxidoreductase subunit F from Synechococcus elongatus PCC 7942

 Score =  227 bits (579), Expect = 2e-63
 Identities = 166/505 (32%), Positives = 249/505 (49%), Gaps = 45/505 (8%)

Query: 5   VLLLLPFVGSCLAAVLPHNARNA-ESILAGLV--ALVGTVQVA--LLYPQVAHGGVIREE 59
           VL LL   G  L  +  + A N    + A L+  AL G+   A  LL  Q++        
Sbjct: 13  VLPLLAATGVGLGLITVNQATNKLRQLNAALIMTALGGSATFAFGLLASQLSGHPTYTRM 72

Query: 60  FLWLPSLGMNLVL--RMDGFAWLFSLLVLGIGALVSLYARYYMSPQDPVPRFFAFFLAFM 117
           F W  +   +L +   +D    +   +V  +  LV LY   YM+      RF+A+   F 
Sbjct: 73  FDWASAGDFHLSMGYTIDPLTTVMLTVVTTVALLVMLYTDGYMAHDRGYVRFYAYLSLFS 132

Query: 118 GAMLGLVISGNLIQLVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLVG 177
            +MLGLVIS NL+Q+  FWEL  + S+LL+G+W+ R  A      A +    G   LL+G
Sbjct: 133 SSMLGLVISPNLVQIYIFWELVGMCSYLLVGFWYDRKAAADACQKAFVTNRVGDFGLLLG 192

Query: 178 ALLLGHVVGSYD-------LDKVLAAGHIIRQHALYPVLLPLILIGALTKSAQFPFQFWL 230
            L L    GS++       L  ++++G +     L  +   L+ +G + KSAQFP   WL
Sbjct: 193 MLGLYWATGSFEFTEIGDRLQSLISSGAL--SAGLATLFGILVFLGPVAKSAQFPLHVWL 250

Query: 231 PHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLSGSEEWFWIVGGAGALTLLLGAFAAM 290
           P AM  PTP+SA +H+ATMV AGVFL+AR++PV         ++   GA T  LGA  A+
Sbjct: 251 PDAMEGPTPISALIHAATMVAAGVFLIARMYPVFEQLPTVMDVIAWTGAFTAFLGASIAL 310

Query: 291 FQNDLKGLLAYSTISHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAGIIDHES 350
            QND+K  LAYSTIS LG + + +G+    A  A +FH++ HA FKA LF+ +G + H  
Sbjct: 311 TQNDIKKGLAYSTISQLGYMVMAMGVG---AYSAGLFHLVTHAYFKAMLFLGSGSVIHGM 367

Query: 351 GT---------RDIRRLSGLIRLVPYTATLAMVASASMAGVPLMNGFLSKEMFFAETVFI 401
                      +D+R + GL + +P TA   ++ + ++AG+P   GF SK+     T   
Sbjct: 368 EAVVGHNPVLAQDMRLMGGLRKYMPVTAITFLIGNLAIAGIPPFAGFWSKDEILGATFAA 427

Query: 402 SSTAWVE--ATLPVIA---------TLAGTFSVAYA-LRFTVDVFFGPTA-----QDLPH 444
           +   W    AT  + A         T  G+F    A ++  +    G TA     +   H
Sbjct: 428 NPILWGVGFATAGLTAFYMFRIYFLTFEGSFRGEDATIQAKLLAEAGVTAGHGHDEHHDH 487

Query: 445 TPHEPPRWMRAPVELLVLTCLVVGI 469
            PHE P  M  P+ +L +   ++G+
Sbjct: 488 VPHESPWTMALPLAILAVPSALIGL 512