Pairwise Alignments

Query, 971 a.a., putative K(+)/H(+) antiporter subunit A/B from Pseudomonas putida KT2440

Subject, 496 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  160 bits (405), Expect = 2e-43
 Identities = 146/492 (29%), Positives = 235/492 (47%), Gaps = 48/492 (9%)

Query: 3   LIVLLLLPFVGSCLAAVLPHN-----ARNAESILAGLVALVGTVQVALLYPQVAHGGVIR 57
           L  L+ LP V + +    P       A+ + +I AG    +         PQ+ H   + 
Sbjct: 2   LSALIWLPIVAATVLLCWPGTLSAAWAQRSAAIAAGAALAIAIALFFQFDPQI-HDWQLL 60

Query: 58  EEFLWLPSLGMNLVLRMDGFAWLFSLLVLGIGALVSLYARYYMSPQDPVPR-FFAFFLAF 116
           E+  W+  LG+   L +DG     SL ++G+ AL++      +  Q+   R ++   L  
Sbjct: 61  EQLPWIEQLGLGYRLGVDGL----SLPLVGLNALLTFLIIAGLERQEQRSRLYYGLMLLL 116

Query: 117 MGAMLGLVISGNLIQLVFFWELTSLFSFLLIGYWHHRADARRG--AYMALMVTGAGGLCL 174
            GA+ G  ++ +L+    F+E+  +  +LLI  W     ARRG  A   L+ T   G  L
Sbjct: 117 SGAVSGAFLAQDLLLFFVFYEVELIPLYLLISIW---GGARRGYAATKFLIYTALSGALL 173

Query: 175 LVGALLLGHV--VGSYDLDKVLAAGHIIRQHALYPVLLPLILIGALTKSAQFPFQFWLPH 232
           L+G L L  +   GS+  +  LAA   I Q      LL LIL+    K+   PF  WLP 
Sbjct: 174 LIGFLALTILSGAGSFAYNPNLAAVLPIAQQV---TLLVLILVAFGIKTPIVPFHTWLPD 230

Query: 233 A-MAAPTPVSAYLHSATM-------VKAGVFLLARLWPVLSGSEEWFWIVGGAGALTLLL 284
           A + A TPVS  L    +       ++ G+ L  ++WP+++      W+ G A  ++ L 
Sbjct: 231 AHVEASTPVSMMLAGVLLKLGTYGILRFGLGLFPQVWPIVAP-----WLAGLA-VVSTLY 284

Query: 285 GAFAAMFQNDLKGLLAYSTISHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAG 344
           G+ +A+ Q D+K ++AYS+I H+G I L     +PL+ + AV  +++H    A LF+  G
Sbjct: 285 GSLSAIVQQDMKKMVAYSSIGHMGYILLAAAAATPLSLLGAVCQMISHGLISALLFLEVG 344

Query: 345 IIDHESGTRDIRRLSGLI---RLVPYTATLAMVASASMAGVPLMNGFLSKEMFFAETVFI 401
            +   +GTRD+R L GL+   R +P   +L ++A  +  G+P M GF+++ M F  +   
Sbjct: 345 FVYSRTGTRDLRVLQGLLTPERGLPIVGSLMILAVMASGGLPGMVGFIAEFMIFRGSF-- 402

Query: 402 SSTAWVEATLPVIATLAGTFSVAYALRFTVDVFFGPTAQDLPHTPHEPPRWMRAPVELLV 461
            ST  V+    ++ T  G  SV Y L      FFG     +   P+     +R  +  L+
Sbjct: 403 -STFTVQTLFCMVGT--GLTSV-YFLLLVNRAFFGRLPDQMETLPNVA---LREHIPALM 455

Query: 462 LTCLVVGIFPTQ 473
           L  L+V IF  Q
Sbjct: 456 LATLIV-IFGVQ 466