Pairwise Alignments

Query, 971 a.a., putative K(+)/H(+) antiporter subunit A/B from Pseudomonas putida KT2440

Subject, 565 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  147 bits (371), Expect = 2e-39
 Identities = 138/468 (29%), Positives = 212/468 (45%), Gaps = 48/468 (10%)

Query: 8   LLPFVGSCLAAVLPHNARNAESILAGLVALVGTVQVALLYPQVAHGGVIREEFLWL---P 64
           LL  +G  +  +LP  A++   +   L  L    Q+A        G ++   FL L   P
Sbjct: 10  LLMILGGLMLPLLPKRAQDPLMVFLPLATLWAVWQIA-------DGPMMLVRFLDLVLEP 62

Query: 65  SLGMNLVLRMDGFAWLFSLLVLGIGALVSLYARYYMSPQDPVPRFFAFFLAFMGAMLGLV 124
             G + V R+  FA +FSL+    G L +L        + P     A  L + G  +G  
Sbjct: 63  VRG-DAVGRL--FASVFSLMAFA-GGLFAL--------KQPRVLERAAALVYAGGAVGCA 110

Query: 125 ISGNLIQLVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLVGALLLGHV 184
           ++G+LI L  FWE+ ++ S L+I      A A+ G   ALM    GG  L+ G  + GH 
Sbjct: 111 LAGDLISLFVFWEIMAVASTLVIWSSDQPAAAKAGMRYALMHL-FGGAVLMAG--IAGHA 167

Query: 185 VGSYDLDKVLAAGHIIRQHALYPVLLPLILIGALTKSAQFPFQFWLPHAMAAPTPVSAYL 244
           +G   LD        +    L      LILIG L  +   PF  W+  A    +   +  
Sbjct: 168 IGGGSLD--------VTAMTLDSPANWLILIGVLVNAGAPPFSAWIADAYPEGSFSGSVF 219

Query: 245 HSATMVKAGVFLLARLWPVLSGSEEWFWIVGGAGALTLLLGAFAAMFQNDLKGLLAYSTI 304
            SA   K  V +L + +P   G+E   WI    G   +  G   A+ +ND++ +L+YS +
Sbjct: 220 LSAFTTKTAVMVLIKGFP---GTELLIWI----GLAMVFYGILYALLENDMRRILSYSIV 272

Query: 305 SHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAG-IIDHESGTRDIRRLSGLIR 363
           + +G +   +G+ + +A   A  H   H  +KA L M+AG ++    G R    L GL R
Sbjct: 273 NQVGFMVCAVGIGTDMALNGAAAHAFAHILYKALLLMSAGSVLMMTGGKRKCTELGGLYR 332

Query: 364 LVPYTATLAMVASASMAGVPLMNGFLSKEMFFAETVFISSTAWVEATLPVIATLAGTFSV 423
            +P T    ++ + +++  P  +GF+SK M  A+        WV A L   A  AG F  
Sbjct: 333 SMPITTVCGIIGALAISAFPFTSGFVSKSM-IAQGAADQHLVWVWALLQ--AASAGVFLH 389

Query: 424 AYALRFTVDVFFGPTAQDLPHTPHEPPRWMRAPVELLVLTCLVVGIFP 471
           A  ++F   VFF    +D    P +PP  MRA + LL   C+ +G+FP
Sbjct: 390 A-GIKFPWFVFF---QKDSGLRPADPPASMRAAMILLAAACIGLGVFP 433