Pairwise Alignments

Query, 559 a.a., putative K(+)/H(+) antiporter subunit D from Pseudomonas putida KT2440

Subject, 487 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

 Score = 98.2 bits (243), Expect = 6e-25
 Identities = 120/529 (22%), Positives = 203/529 (38%), Gaps = 86/529 (16%)

Query: 30  RHIKARLNLLSTFSGLAIAACLLLWVRTQGQAASIGV---------YLPGNWPAPFGI-- 78
           +H  A   LL T + + +    + W R   Q   + V          LP    AP  +  
Sbjct: 6   QHFIALAPLLITSATIIVVMLAIAWRRNHSQTFLLSVAGLNLALLSILPALKVAPLAVTP 65

Query: 79  VLVVDHLSALLLTLTGVIGFSALLFARARWDGAGASF----HALFQIQLMGLYGAFLTAD 134
           ++ +D  + L + L  V   + +  A A     G+ +      L+ + LM   G  +   
Sbjct: 66  LMQIDSFACLYMALILVATLACVTLAHAYLGDGGSGYPGNREELYLLILMAAAGGLVLVS 125

Query: 135 ---LFNLFVFFEVLLAASYGLLLHGSGRAR-VRAGLHYIAINLFASSLFLIGAAMLYGVT 190
              L +LF+  E+L    YGL+ +     R + AG+ Y+ ++   S+  L G A+LY   
Sbjct: 126 AQHLASLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEA 185

Query: 191 GTLNMADLALKIPLV----PEADRGLLHAGAAILAMAFLVKAGIWPLNFWLVPAYASASA 246
           GTL+   +   +       P A  GL   G  ++ +AF  K  + P + W    Y  A A
Sbjct: 186 GTLSFVGIGQALAATGLPSPIAQLGL---GMMLIGLAF--KLSLVPFHLWTPDVYEGAPA 240

Query: 247 PVAALFAIMTKVGLYAVLRLWTLLFSGQAGASAHFGGEWLVYGGLVTLAVAAVSILAAQR 306
           PVAA  A  +KV ++AV+     LF     AS+      L    + ++    +  L    
Sbjct: 241 PVAAFLATASKVAVFAVM---VRLFQISPVASSGVLSNVLTIIAIASILFGNLLALTQSN 297

Query: 307 LERMAALSILVSAGTLLGAVGFAQAALTGAALFYLVNSTLALCALFLLAELVERSRSANE 366
           L+R+   S +   G LL A+  ++     A   YLV   +     F +  L+    +  +
Sbjct: 298 LKRLLGYSSIAHFGYLLIALIASKGLAVEAIGVYLVTYVITSLGAFGVITLMSSPYNGRD 357

Query: 367 APLDEEEDAMPPPLESLHPPKGINLDDEQQVVIGQIIPWTMAFLGLSFIACALLIIGMPP 426
           A             ++L+  +G+               W   +L        L + G+P 
Sbjct: 358 A-------------DALYEYRGLF--------------WRRPYLTAVLTVMMLSLAGIPL 390

Query: 427 LSGFVGKLNLISALFNPLGLGVPAEQPLSAAGWGLVALLILSGLASLIAFGRVGIQRFWK 486
            +GF+GK  +I+        GV A Q      W LV  L+L     +  + RV +  +  
Sbjct: 391 TAGFIGKFYIIAT-------GVEAHQ------WWLVGSLVLGSAIGVFYYLRVMVTLYLM 437

Query: 487 PEERPSPVLRRYEC----------LPIVILLGLCLILSFKAEPLLRYTQ 525
                 P LRR++           + ++ +  L   L    +PLL   Q
Sbjct: 438 -----EPNLRRHDAELHWEQKAGGVMLLAIAVLAFFLGVYPQPLLTLVQ 481