Pairwise Alignments

Query, 559 a.a., putative K(+)/H(+) antiporter subunit D from Pseudomonas putida KT2440

Subject, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (595), Expect = 1e-65
 Identities = 170/549 (30%), Positives = 278/549 (50%), Gaps = 74/549 (13%)

Query: 8   IVAPILLPLITAAIMLLLGEKHRHIKARLNLLSTFSGLAIAACLLLWVRTQGQAASIGVY 67
           +  P+++ L+TA  + L G ++R +   L+++ +   L   A L + + T G A SI   
Sbjct: 6   LTLPVVISLLTAVAIFLAG-RNRWLTNGLSVICSVINLFTGALLTITIYTHGPA-SIAF- 62

Query: 68  LPGNWPAPFGIVLVVDHLSALLLTLTGVIGFSALLFARARWDG--AGASFHALFQIQLMG 125
             G WPAPFGIV V D LS  ++ +T +IG  ++++A A      + A +HAL  + L G
Sbjct: 63  --GQWPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAG 120

Query: 126 LYGAFLTADLFNLFVFFEVLLAASYGLLLHGSGRARVRAGLHYIAINLFASSLFLIGAAM 185
           +YGAFLT D+FNL+V+FEV+L AS+GL++  + + ++   + Y+ +NL ++ +FL+   +
Sbjct: 121 VYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGL 180

Query: 186 LYGVTGTLNMADLALKI-PLVPEADRGLLHAGAAILAMAFLVKAGIWPLNFWLVPAYASA 244
           LYG TGTLN+ADL  K   L PE    L    A +L  AF +KA ++PL  WL  +Y + 
Sbjct: 181 LYGATGTLNLADLHDKAQSLAPEMKTML----AGLLLFAFSIKAALFPLFAWLPASYHTL 236

Query: 245 SAPVAALF-AIMTKVGLYAVLRLWTLLFSGQAGASAHFGGEW---LVYGGLVTLAVAAVS 300
            + + ALF A++TKVG+YA+LR++TL+F          G  W   L+    +T+    + 
Sbjct: 237 PSAIVALFAALLTKVGVYALLRVFTLVFPLD-------GSGWQPVLLGIAALTMLTGVLG 289

Query: 301 ILAAQRLERMAALSILVSAG-TLLGAVGFAQAALTGAALFYLVNSTLALCALFLLAELVE 359
             +   ++++ +  I+   G  ++G   +   A+TG A+FY+++  L    LFL+  L+ 
Sbjct: 290 AASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITG-AIFYVIHHILVKGNLFLIGGLIG 348

Query: 360 RSRSANEAPLDEEEDAMPPPLESLHPPKGINLDDEQQVVIGQIIPWTMAFLGLSFIACAL 419
           R     +                            Q   + + +PW    L   F+  A 
Sbjct: 349 RKYGTTQL--------------------------TQLGGVYRAMPW----LTFGFLLAAF 378

Query: 420 LIIGMPPLSGFVGKLNLISALFNPLGLGVPAEQPLSAAGWGLVALLILSGLASLIAFGRV 479
            + G PPLSGF GK  +I A              L+A  + L A+ +L GL ++ +  ++
Sbjct: 379 SLAGFPPLSGFWGKFLVIKA-------------SLAAELYWLAAIALLVGLLTIFSMTKI 425

Query: 480 GIQRFWK--PEERPSPVLRR----YECLPIVILLGLCLILSFKAEPLLRYTQDTAASLQA 533
             + FWK  P       L R       LPI++L    L++   A+P  ++    A  L  
Sbjct: 426 WNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQFATLAAEQLLT 485

Query: 534 PDAYIKAVM 542
           P AYI AV+
Sbjct: 486 PTAYIHAVL 494