Pairwise Alignments

Query, 559 a.a., putative K(+)/H(+) antiporter subunit D from Pseudomonas putida KT2440

Subject, 533 a.a., NAD(P)H-quinone oxidoreductase subunit D from Synechococcus elongatus PCC 7942

 Score = 93.6 bits (231), Expect = 2e-23
 Identities = 124/439 (28%), Positives = 187/439 (42%), Gaps = 64/439 (14%)

Query: 12  ILLPLITAAIMLLLGEKHRHIKARLNLLSTFSGLAIAACLL--LWVRTQGQAASIGVYLP 69
           ILLP++ A  + L+ +K       +   S F GLA  A ++   W       A + +   
Sbjct: 13  ILLPILAALPIPLIPDKDGRT---VRWYSLFVGLADFALMVYAFWQHFDRSEAGLQMVEK 69

Query: 70  GNWPAPFGI--VLVVDHLSALLLTLTGVIGFSALLFARARWDGAGASFHALFQIQLMGLY 127
            +W    G+   L VD LS  L+ LTG++   A+L   A W+        LF   L+ LY
Sbjct: 70  ISWVPQIGLNWSLAVDGLSMPLVLLTGLVTTLAIL---ASWNINVKP--KLFHFLLLLLY 124

Query: 128 GA----FLTADLFNLFVFFEVLLAASYGLLLHGSGRARVRAGLHYIAINLFASSLFLI-G 182
           GA    F   D+   F+ +E+ L   Y L+    G  R  A   +I     AS   L+ G
Sbjct: 125 GAQIAVFTAQDMMLFFLVWELELVPVYLLISIWGGPKRQYAATKFILYTALASLFILVAG 184

Query: 183 AAMLY-GVTGTLNMADLALK-IPLVPEADRGLLHAGAAILAMAFLVKAGIWPLNFWLVPA 240
            A+ + G + + ++ +L LK   L  E    L +AG  I   AF VK  I+PL+ WL  A
Sbjct: 185 LALAFSGDSFSFDLTELGLKDYSLWLEL---LAYAGFLI---AFGVKLSIFPLHTWLPDA 238

Query: 241 YASASAPVAALFA-IMTKVGLYAVLRLWTLLFSGQAGASAHFG-GEWLVYGGLVTLAVAA 298
           +  A+AP + L A I+ K+G YA++R     F+ Q    AH      L   G+V +   A
Sbjct: 239 HGEANAPGSMLLAGILLKMGGYALIR-----FNVQLLPEAHIRFAPVLAVLGIVNIIYGA 293

Query: 299 VSILAAQRLERMAALSILVSAG-TLLGAVGFAQAALTGAALFYLVNSTLALCALFLLAEL 357
           ++  A   L+R  A S +   G  LLG   +    L GA L  L +  +A    FL    
Sbjct: 294 LNAFAQDNLKRKIAYSSISHMGFVLLGIAAYNSLGLNGALLQMLSHGLIAAALFFLAGVA 353

Query: 358 VERSRSANEAPLDEEEDAMPPPLESLHPPKGINLDDEQQVVIGQIIPWTMAFLGLSFIAC 417
            ER+ +                           L   Q   + + +P T A     F   
Sbjct: 354 YERTHT---------------------------LQIPQISGLAKQMPITFAL----FTVT 382

Query: 418 ALLIIGMPPLSGFVGKLNL 436
           A+  + +P +SGFV +L +
Sbjct: 383 AMASLALPGMSGFVSELTV 401