Pairwise Alignments

Query, 559 a.a., putative K(+)/H(+) antiporter subunit D from Pseudomonas putida KT2440

Subject, 490 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  113 bits (282), Expect = 2e-29
 Identities = 120/518 (23%), Positives = 209/518 (40%), Gaps = 62/518 (11%)

Query: 1   MSDLSQLIVAPILLPLITAAIMLLLGEKHRHIKARLNLLSTFSGLAIAACLLLWVRTQGQ 60
           MS    L +A IL   + A +++ L  K   +   + +++     A  A L   V   G+
Sbjct: 1   MSAAPALSLAWILATPLAATLVIALNAKRPRLGEAIGVIAALLTFAQVAALTPTVLAGGR 60

Query: 61  AASIGVYLPGNWPAPFGIVLVVDHLSALLLTLTGVI----GFSALLFARARWDGAGASFH 116
              + + +    P    +V  +D L  L   +   +    G  ++ + RA  +     FH
Sbjct: 61  PTLVMLSVMDTIP----LVFTLDPLGLLFALVAAALWIPAGLYSIAYLRANHEAHQPRFH 116

Query: 117 ALFQIQLMGLYGAFLTADLFNLFVFFEVLLAASYGLLLHGSGRARVRAGLHYIAINLFAS 176
           A F + +    G  L  +LF LF+F+E L  ++Y L+ H      VRAG  Y+ + L  S
Sbjct: 117 AYFALAIACTLGIALAGNLFTLFLFYEALTLSTYPLITHQGTAQAVRAGRIYMGMLLVPS 176

Query: 177 -SLFLIGAAMLYGVTGTLNMADLALKIPLVPEADRGLLHAGAAILAMAFLVKAGIWPLNF 235
             L L+   + + + G ++     +    +     GLL A    L +    KA + P + 
Sbjct: 177 IGLLLVAIILTHSLAGRMDFQPGGILAGRIDGPLVGLLLA----LFVFGTAKAALMPFHR 232

Query: 236 WLVPAYASASAPVAALF--AIMTKVGLYAVLRLWTLLFSGQAGASAHFGGEWLVYGGLVT 293
           WL PA   A  PV+AL     + K G++ + ++   +F     A++ + G WL +   ++
Sbjct: 233 WL-PAAMVAPTPVSALLHAVAVVKAGVFTIAKVVISIFGIDLLAASSWTG-WLTWVAGIS 290

Query: 294 LAVAAVSILAAQRLERMAALSILVSAGTLLGAVGFAQAALTGAALFYLVNSTLALCALFL 353
           + +A++  L    L+R  A S +     ++ A+         AA  ++V        LF 
Sbjct: 291 VILASLIALRQDNLKRRLAYSTISQLAYVVMALSLFSPLGVLAAGLHIVVHAFGKITLFF 350

Query: 354 LAELVERSRSANEAPLDEEEDAMPPPLESLHPPKGINLDDEQQVVIGQIIPWTMAFLGLS 413
            A  +  +   +                             Q   IG+ +PWTM     +
Sbjct: 351 AAGAIHTATHKDSV--------------------------SQFAGIGRAMPWTMG----A 380

Query: 414 FIACALLIIGMPPLSGFVGKLNLISALFNPLGLGVPAEQPLSAAGWGLVALLILSGLASL 473
           F   +L +IG+PP +GF+ K  + SA F                 WG+VA+LI S + + 
Sbjct: 381 FAVASLSMIGLPPTAGFLSKWGIFSAAF-------------QGQTWGVVAVLIASTVLNA 427

Query: 474 IAFGRVGIQRFWKPEERPSPVLRRYECLPIVILLGLCL 511
             F  +    F KP   P     +    P +++  LCL
Sbjct: 428 AYFLPILHTAFLKPP--PGEAGAKIAEAPPLMVAALCL 463