Pairwise Alignments

Query, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 382 a.a., acyl-CoA dehydrogenase, short-chain specific from Caulobacter crescentus NA1000

 Score =  310 bits (795), Expect = 3e-89
 Identities = 157/370 (42%), Positives = 240/370 (64%), Gaps = 1/370 (0%)

Query: 5   DEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDTGY 64
           + ++Q+ D V  F  ERL+P   Q  ++   P + I+EM  LGLFG+ +PE++GG     
Sbjct: 6   ETREQLIDTVARFVAERLRPIEAQVAENDAVPDDVIEEMKGLGLFGLTIPEEFGGLGLTM 65

Query: 65  VAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFALT 124
              A+   E+     A  ++   +  +G   ++ FGN++QK ++L  +A+GA++ +FALT
Sbjct: 66  EEEALVAIELGRASPAFRSVFGTNVGIGSQGLVMFGNDEQKAKWLPGIASGAVITSFALT 125

Query: 125 EPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEA-GKRGISAFI 183
           EP+AGSD+++++TRA  +GD Y+LNGSK++IT+   A +  V A T+P+A G  G+SAF+
Sbjct: 126 EPEAGSDSAAVQTRATRDGDDYILNGSKRYITNAGKASLFTVMARTNPDAKGGAGVSAFL 185

Query: 184 VPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRIG 243
           VP D PG  V + E K+GQ  +    + FDNV+VP  NRLGAEGEG+K+A+  L+ GR+ 
Sbjct: 186 VPRDLPGLTVGKPEKKMGQQGAHIHDVTFDNVRVPAWNRLGAEGEGFKVAMQVLDRGRLH 245

Query: 244 IASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAAL 303
           IA+  VG+A         YA+ER+ FG+P+   Q +   +AD  T+   A+ +VL  A  
Sbjct: 246 IAAVCVGVAERLIADCVAYASERKQFGQPIASFQLIQAMIADSKTEALAAKALVLETARK 305

Query: 304 RDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYEGT 363
           RDAG    +EA+ +KLFASEM  +V   A+Q  GG GY++D+ +ER+YRDVR+ +IYEGT
Sbjct: 306 RDAGVNVTLEAASSKLFASEMVGRVADRAVQVFGGAGYVADYGIERLYRDVRIFRIYEGT 365

Query: 364 SDIQRMVIAR 373
           S +Q+++IAR
Sbjct: 366 SQVQQLIIAR 375