Pairwise Alignments

Query, 561 a.a., putative acyl-CoA synthetase from Pseudomonas putida KT2440

Subject, 636 a.a., acetate--CoA ligase from Methanococcus maripaludis S2

 Score =  224 bits (571), Expect = 8e-63
 Identities = 176/546 (32%), Positives = 267/546 (48%), Gaps = 42/546 (7%)

Query: 40  ALNACVECCDRHAGDG---KLALIHEDRDGNSACYSFDQLQVQAARFANVLKAQGVGAGD 96
           +LNA   C DRH       K A+I E  DG+    ++ +L  +  +FANVL+  GV  GD
Sbjct: 59  SLNASYNCVDRHIKGNRRNKAAIICEKEDGSCGILTYYELYREVNKFANVLENLGVEKGD 118

Query: 97  RVAGLMPRTPELLVTILATWRLGAVYQPLFTAFGPKAIEHRLEQSHARVVVTDS--HNRA 154
            V   MP   E ++ +LA  R+GA++  +F+ F   A+  R+  S ++++VT +  + R 
Sbjct: 119 VVTIYMPMMTEAIIAMLACSRIGAIHNVVFSGFSSDALADRINDSKSKILVTTNLLYRRG 178

Query: 155 KLDDVHA--------CPTI-ITVKARSG----------ELDFQQCLERAADVCEPVMRSG 195
           K  D+          C +I   V A+ G          E  + + +  A    EPV    
Sbjct: 179 KEIDLKKILDKALLNCNSIKHVVYAKRGIEEFNLVSGKEYFWDELMGGAKSYVEPVPVES 238

Query: 196 NDPFLLMFTSGTTGPAKPLEVPLRAIVAFQGYMRDAIELLPE-DNFWNLADPGWAYGLYY 254
             P  +++TSGTTG  K +       + +     D    L E D FW  AD GW  G  Y
Sbjct: 239 EHPLFILYTSGTTGSPKGVVHSTGGYLTYATKTMDWTWGLNEMDVFWCTADIGWITGHTY 298

Query: 255 AVTGPLSLGHATTFYDGPFSVESCAR---VIDKLGITNLAGSPTAYRLLIAAGKDF-SAP 310
            V GPLSLG     Y+G        R   +++  G+T L  +PTA R+L+  G+ + +  
Sbjct: 299 VVYGPLSLGATIVLYEGAIDYPEPDRLWGIVENHGVTILYTAPTAIRMLMMYGEKWVNTH 358

Query: 311 IKGRLRVVSSAGEPLNPEVIRWFADELG---VTIHDHYGQTEL-GMVLCNHHGLQH-PVH 365
               LR++ S GEP+NP   +W+   +G     I D Y QTE  G ++    G+Q  P+ 
Sbjct: 359 DLSTLRLLGSVGEPINPRAWKWYYKVIGKEKCPICDCYWQTETGGHIIYPPIGIQSVPLK 418

Query: 366 LGSAGYAIPGHRIVVVDEQGNELPAGQPGILAVDREQSPL---CWFGG--YHGLPTKAFV 420
            GSA +   G  + VVD +GN + A   G L + R    +    W     Y       F 
Sbjct: 419 PGSATFPGIGIDVDVVDNEGNPVDANVKGNLIIKRPWPGMLAGLWNNDERYRAAYWDRFK 478

Query: 421 GKYYLSGDTVELNPDGSISFVGRSDDVITTSGYRVGPFDVESALIEHPAVIEAAVIGKPD 480
            K+  S   ++ + DG I  +GRSD+V+  SG+R+G  ++E  L+ +  V E+AV+GKPD
Sbjct: 479 NKFSTSDYAIK-DQDGYIWVLGRSDEVLNVSGHRIGTAELEHELVSNKMVAESAVVGKPD 537

Query: 481 PERTELIKAFVVLASGY--AGSVELEETLRQHVRQRLYAHAYPREIEFVSELPKTPSGKL 538
             + E+  AFV+L   Y    S E++  L +H+R  +     P  I FV++LPKT SGK+
Sbjct: 538 DVKGEVPVAFVILNEKYRELPSNEVKAELIKHIRDTVGPIGTPAMIFFVNKLPKTRSGKI 597

Query: 539 QRFILR 544
            R IL+
Sbjct: 598 MRRILK 603