Pairwise Alignments

Query, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 3/309 (0%)

Query: 23  GEPDSGLLARAGIAVEQLHLPEARVSAESYARLWRLLARRCNDEFFAMDTRGLCSGSLAF 82
           G P   LLA +GI+   L   + R++     ++         D    +  R   S S   
Sbjct: 23  GLPSDALLAGSGISAADLSRADTRITTNQEMQVCANAVALKRDIGLGLGLRMHVS-SYGM 81

Query: 83  MCRASMGQPTLGAGLETSLAFLSLMLQDMQPSLVRQQGLAEIVINEPRDEPRRAFTYFTF 142
           +  A +   TLG  L  +L + +L+    + +L           ++ R+ P  A     F
Sbjct: 82  LGYALLTSATLGDALRLALRYPALLGTLFELNLDDDGQYVWFSASDYRENPALAVFNAEF 141

Query: 143 WMIVHGVTCW-LAGRRIPILSIDLRCAEPPFCDDYRVMFSENLHFERPRTRMIIASQYLD 201
            M+   V C  L G  +P+ +       P +   Y  +F   + F+           +LD
Sbjct: 142 CMVSLRVICNDLLGHALPLRAARFEHPAPDYQARYAALFDCPVRFDSVDNAFAFERHWLD 201

Query: 202 LPLRRSEEELQRFLAEAPGNILVKYRDPASLGRRIRTDLLRLAPEQWPDADRLARQLCLS 261
            PL  ++      +AE       ++    +   RIR  LL       P  + LA Q+  S
Sbjct: 202 QPLPLADPVTHHAMAERCRRQNTEFTGRQAWLGRIR-QLLDAQLNAAPGLEGLAEQMNCS 260

Query: 262 PSTLRRRLAEEGQNYQGLKDSVRRELAIAWLSQEDVAMGELAERLGFADSSSFYKAFRKW 321
             TLRR L + G +YQ L D +R E A   L ++ + +  +AERLGF++++SF  AF +W
Sbjct: 261 ARTLRRHLKDLGCSYQELLDELRFERAKQMLCEDQLPIYRIAERLGFSETASFRHAFVRW 320

Query: 322 FGCNPGHYR 330
            G  P  +R
Sbjct: 321 SGVAPSQFR 329