Pairwise Alignments

Query, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 341 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  115 bits (288), Expect = 2e-30
 Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 7/288 (2%)

Query: 46  RVSAESYARLWRLLARRCNDEFFAMDTRGLCSGSLAFMCRASMGQPTLGAGLETSLAFLS 105
           RV+ +    L+++ A    DE   + +R +   +L  +         L A L     F +
Sbjct: 58  RVTLDQIVELYQIAAAETGDEMPGLWSRPVRPRALQHLLTTVREAGNLPAALYRFSTFWN 117

Query: 106 LMLQDMQPSLVRQQGLAEIVINEPRDEPRRAFTYFTFWMIVHGVTCWLAGRRIPILSIDL 165
           L+L D    L  ++    + +     +    F +     + HG+  WLAG  +P+ ++  
Sbjct: 118 LILDDYHIELKSEESCISLSLVPRGAQETHRFGHMLLLKLAHGLLSWLAGYEVPVQAVQF 177

Query: 166 RCAEPPFCDDYRVMFSENLHFERPRTRMIIASQYLDLPLRRSEEELQRFLAEAPGNILVK 225
              +P F  DY V+F   + F +  + +    Q L  P  RS  EL  FL  AP + +  
Sbjct: 178 AFDQPGFAQDYGVIFPAPVRFSQLCSAISFDPQQLGPPQPRSPAELAAFLDRAPRDWIFT 237

Query: 226 YRDPASLGRRIRTDLLRLAPEQWPDADRL---ARQLCLSPSTLRRRLAEEGQNYQGLKDS 282
                 L  +IR  L R     W D  RL   A  L ++P TL RRL +E  ++Q +KD+
Sbjct: 238 GFREHRLSLQIRDFLYR---SNWEDC-RLGDAAAMLNVTPRTLMRRLEDEAASFQSIKDA 293

Query: 283 VRRELAIAWLSQEDVAMGELAERLGFADSSSFYKAFRKWFGCNPGHYR 330
           +RR++AI  L     ++ +++  LGF+ S++F++AFR+W G     YR
Sbjct: 294 LRRDIAIRDLRAGHKSIEDISHDLGFSSSANFHRAFRRWTGGTTSSYR 341