Pairwise Alignments

Query, 354 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (429), Expect = 8e-47
 Identities = 105/347 (30%), Positives = 173/347 (49%), Gaps = 15/347 (4%)

Query: 5   ALQNKALAVLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAAT 64
           A  ++ L V L    +A +W++ PY  +I  A I+ +L  P+      +     NLAA  
Sbjct: 8   ASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFL 67

Query: 65  STLVCLLVAILPVIIISALLVQEGA----TLYQRIESGQLDIA---GYVERGKDMLPAFA 117
           S +V  ++ ++P++ I   +VQ+G+     LY  +  G +       +V +G  +   + 
Sbjct: 68  SCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYL 127

Query: 118 QRGLDNMGMGNLDGLRDKITKWATQ-GSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFL 176
                     +   +  +I ++AT  GS +++  A   G  T  F++ F +M+++LFF L
Sbjct: 128 P-----FEEISPQQIAQRIGQFATTFGSNLVSISAKILGDAT-SFVMHFFLMLFVLFFLL 181

Query: 177 RDGPEVARRVRMAVPLPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIP 236
           RD  ++   +R  +PL   Q+ RL  +   V ++ V G+ L AI QG  GG   W+   P
Sbjct: 182 RDHDKIISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP 241

Query: 237 SALVWAVLMAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLRP 296
             L W  +M F S +P VG  +IW P   Y  LTG     + L  + V V+G +DN+LRP
Sbjct: 242 G-LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRP 300

Query: 297 ILVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVSSWAIF 343
            L+     M   +I  S LGG+ +FGL G + GPLI A+ +  + I+
Sbjct: 301 FLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIY 347