Pairwise Alignments

Query, 354 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 321 a.a., AI-2E family transporter from Methanococcus maripaludis S2

 Score =  117 bits (292), Expect = 5e-31
 Identities = 85/323 (26%), Positives = 157/323 (48%), Gaps = 34/323 (10%)

Query: 21  AFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAATSTLVCLLVAILPVIII 80
           A  ++L P+ G I  AV +  +  PL   L  + GR          ++CLL  ++P +++
Sbjct: 7   ALIYMLWPFMGIIALAVAVAYMTKPLYDILKPKFGR------TYGAIICLLGIVIPSLLL 60

Query: 81  SALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQRGLDNMGMGNLDGLRDKITK-- 138
             L+ ++  T         LDI   + +   +L        +++G   +DG    ++K  
Sbjct: 61  VVLVAEDVVTFLL-----SLDIENIITKVTPIL--------NDIGYLRVDG--PDVSKPF 105

Query: 139 ---WATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARRVRMAVPLPEH 195
              W+   S+ L +   S        L+    + ++ F+FL+DG ++     + VP  E 
Sbjct: 106 SDIWSV--SKPLLNSFASQISSIPSLLMKLLFLSFMTFYFLKDGDKLTDSFLIYVP--ED 161

Query: 196 QKRRLQL---KFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPSALVWAVLMAFLSLLP 252
           +KR   L   + ++ ++    GN + ++  G +    +W++ IP+ +    L   L++LP
Sbjct: 162 KKRNTALFLSEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSGILNILP 221

Query: 253 AVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLV-DNVLRPILVGKDTRMPDYLIL 311
            VG   I+ P+  Y+LLTG I +G++L  FG++ + L  D  +RP ++ KD  +   L+L
Sbjct: 222 VVGGWTIYVPLTVYYLLTGEIAKGILLGLFGIIFLSLAPDFAIRPRVISKDGDLHPALVL 281

Query: 312 VSTLGGLAVFGLNGFVIGPLIAA 334
           ++ L G  VFG+ G  IGP+I A
Sbjct: 282 IAFLIGPLVFGIPGLAIGPIIVA 304