Pairwise Alignments

Query, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

 Score =  182 bits (462), Expect = 1e-50
 Identities = 107/316 (33%), Positives = 169/316 (53%), Gaps = 18/316 (5%)

Query: 22  EEKVVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDTPEVLETKLLTGGSG-YDVVVPSS 80
           + K +  Y+W +YV P  L++F +ETG KV Y T+++ E +  KL T   G YD+VVPS+
Sbjct: 25  DSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPST 84

Query: 81  TVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNRHAVPYTWGTLGLGVNVEA 140
             + +  K   LQ +D   +  +GNLD ++L K    DP N +++PY WG   +G+N + 
Sbjct: 85  YFVDKMRKEGMLQKIDKSKLSNFGNLDPEMLNK--PFDPNNDYSIPYIWGATAIGINSDE 142

Query: 141 VRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVALNYLGKDPYSQNKDDLA 200
           +  +     + S   L+KPEY + L      L D  +EV  VAL  LG    + +  ++ 
Sbjct: 143 IDPKT----VTSWADLWKPEYKSSL-----LLTDDAREVFQVALRKLGYSGNTTDPKEIE 193

Query: 201 AAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGDAAMAADQARRAGKPFEVIYRI 260
           AA N L +L P+++   +    N    G V L + +NG A +A    R+AG P EV++  
Sbjct: 194 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAWVA----RQAGTPLEVVW-- 247

Query: 261 PREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALTNTLFFANANQAATPLVDEA 320
           P+EG + W D+L IP +A + + A   I F+L+PE    +  T+ +   N AA  ++   
Sbjct: 248 PKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPEIAKQVAETIGYPTPNLAARKMLSPE 307

Query: 321 VRNDPDIYPSAEVRQR 336
           V ND  +YP A   Q+
Sbjct: 308 VANDKSLYPDAATIQK 323