Pairwise Alignments

Query, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 373 a.a., ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  286 bits (731), Expect = 8e-82
 Identities = 139/344 (40%), Positives = 215/344 (62%), Gaps = 1/344 (0%)

Query: 18  PLQAEEKVVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDTPEVLETKLLTGGSGYDVVV 77
           P  A +  +N+Y+W+DY+A  T+  FE++ G KV+YD +D+ + L+ KLL G SGYD+VV
Sbjct: 28  PALAADTELNVYNWSDYIAKDTISNFEKQDGIKVKYDNYDSDDTLQAKLLAGSSGYDIVV 87

Query: 78  PSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNRHAVPYTWGTLGLGVN 137
           P+S  +A+ ++A   Q LD   +P   NLD  L+  +A+ DPGN++ VP+ +GT G+G N
Sbjct: 88  PTSNYMAKQIQAGVYQKLDKSKLPNLANLDPVLMKMIADADPGNQYGVPWAYGTDGIGYN 147

Query: 138 VEAVRQRLG-DVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVALNYLGKDPYSQNK 196
           V+AV++ LG + P+DS  L+F P   ++LKGCG+++ D   +V    L Y+ KDP S N 
Sbjct: 148 VQAVQKALGANAPVDSWALVFDPANLSKLKGCGVSILDQAVDVFAATLQYMHKDPNSTNP 207

Query: 197 DDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGDAAMAADQARRAGKPFEV 256
            D  AA  +L +++P I+   +   INDLAN  VC+A  ++GD  +A+ +   A + +++
Sbjct: 208 ADYQAAYEVLKKIRPYITQFNSSGYINDLANNDVCVAFGWSGDVGIASRRTEEAKRSYQI 267

Query: 257 IYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALTNTLFFANANQAATPL 316
            +   +EG L+W D +VIPKDAPHPEAA  +I ++  P+  AA+TN +F+  AN+AA   
Sbjct: 268 KFSNVKEGGLLWFDVMVIPKDAPHPEAALKWINYISDPKVNAAITNEVFYPTANKAARQF 327

Query: 317 VDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTAFRS 360
           V  AV  D  +YP  EV  ++   + M    LR  NRLW   ++
Sbjct: 328 VTPAVAQDKTVYPGDEVLSKMTLMKPMPTDILRLENRLWAQLKT 371