Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  144 bits (364), Expect = 2e-39
 Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 3/291 (1%)

Query: 4   QVHDPDLHLLRLFVTVVEAGGFSAAQGVLGLSQPTISQRMAQLEARLGYRLCSRGKGGFR 63
           QVHD DL LLR+FV +VE GG SAA+  L + + TIS  ++ LE RLG +LC RG+ GF 
Sbjct: 2   QVHDVDLKLLRIFVAIVECGGLSAAESRLNIGRSTISAHLSDLEVRLGIKLCKRGRSGFE 61

Query: 64  LTEKGELLLEAARGLLLNIEQFRQQANGVAGRLLGTVRIGMAENQDKAVSLKLAAAIAAF 123
           LTE G +  +A+  LL + + F          L G V I + +         +A  IAA 
Sbjct: 62  LTESGRVTYQASLELLQHCDAFASTVASAKQELAGRVSIAVIDTLVSDPRCDIAGVIAAL 121

Query: 124 RRREESVQLELVSAPPAELERLLLEQRLDYAISYFSGNQAAFDYQPLFAERQRLYCGRGH 183
           + +   +Q ++      E+E  ++  R    I     +    DY PL  E   LYCG GH
Sbjct: 122 KAKSNHIQFDINVCEAREVETSVVNGRSLVGIGVSRHHLRGLDYHPLHNETNYLYCGVGH 181

Query: 184 VLYGETDVGLERLLDMDQV--RHPYRFLKGGEPFQSRRSTAVAEQIESVLTFILSGQHIG 241
            L+      +  LL   +V   +  R  +      + ++TA A   E +   ILSG+ IG
Sbjct: 182 PLFDCLPDKVPALLQNAEVITSNYMRDKEMRNDDLNYQNTATAYHDEGIAHLILSGKFIG 241

Query: 242 YLPCHCAQAWEAEGLLWALDPE-LDFAVPFTLARHRAQGVGEAAHVFAQDL 291
           YLP H A  W  +GL  A+ PE   + +P  L   ++      A     ++
Sbjct: 242 YLPEHYASHWVDKGLFKAILPEKYSYQIPVVLITSKSNAATPLATALIDEI 292