Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 168 a.a., FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (274), Expect = 3e-29
 Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 4/155 (2%)

Query: 13  FQEHYDDLLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARSFIFRVAGNLAID 72
           F+ H  +LL FLTR++   + AAD+ QET+L+     E    + + R+F++R+A NL ID
Sbjct: 14  FESHSSELLHFLTRQVKCAELAADLRQETWLRFRR-RESGQEIGNLRAFLYRIARNLIID 72

Query: 73  ALRREQRIAASHDDSDGACEVACPAPAPEAALLARERLQILDQALLQLPDNARQALLLNR 132
             RR+Q+     ++   + E+    P PE A    +RL+ L + +  LP + RQAL  NR
Sbjct: 73  -YRRQQKSRPVEEEL--SIELVSAQPGPERAASDAQRLERLQRVVQDLPPHLRQALFWNR 129

Query: 133 VEGLTQKQVAQRLGVSESMVAKYIGQALRHCRGRL 167
           ++GLTQ+++ +RLGVSESM  +YI +AL HC+ ++
Sbjct: 130 LDGLTQREIGERLGVSESMAGRYILKALEHCQQQM 164