Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 327 a.a., Antisigma transmembrane sensor FpvR from Pseudomonas fluorescens FW300-N2E2

 Score =  109 bits (272), Expect = 1e-28
 Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 31/229 (13%)

Query: 159 ALRHCRGRLKQAGVAA---SVVLLVAAVAGWQQAPILLADYHTAVGERQVITLTDGTRVT 215
           A R  R  L +  VAA   +V L +   +G   +     +Y TA+GER+ I L DG+ + 
Sbjct: 78  AERPKRRPLLRYAVAAGLFAVALGLGLFSGLSSSTDYSGEYTTALGERRHIALPDGSMID 137

Query: 216 LNSASALSVAFSEHERRVVLDAGEALFETADDS-RPFVVETAGARVQGNAATFSVQRDG- 273
           LNS S + + F+ H+RRV L  GEALF    D+ RPF V+    +V      F V+RD  
Sbjct: 138 LNSRSRVRIQFAHHQRRVELVEGEALFSVEHDAGRPFTVDAGNGQVTVTGTRFDVRRDAD 197

Query: 274 --HVVLARGEAKVGEH-----ELAV-AADAGTQM------------------AWQRGKLI 307
              V +A+G  KV        +LA+  A  GTQ+                  AW+ GKL+
Sbjct: 198 KTRVAVAQGSVKVQGRAAPPAQLAILTAGLGTQIDAQGKVATPYAVNAEALTAWRNGKLV 257

Query: 308 FNGKPLGQVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTL 356
           FN  PL +V  E+ RYR   + +  + +  + ++ VF  D+PEALL+ L
Sbjct: 258 FNNAPLKEVAEEVSRYRTHPLRVGSAAVGDLRLTSVFRADDPEALLKAL 306