Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 301 a.a., Iron siderophore sensor protein from Pseudomonas fluorescens FW300-N2E2

 Score =  103 bits (258), Expect = 5e-27
 Identities = 80/242 (33%), Positives = 118/242 (48%), Gaps = 29/242 (11%)

Query: 159 ALRHCRGRLKQAGVAASVVLLVAAVAGWQQAPILL-ADYHTAVGERQVITLTDGTRVTLN 217
           AL   R   K    AA   +L   +  +   P+ L AD+ T VGERQ + L DG++V LN
Sbjct: 63  ALSRLRAHWKPLATAA---VLFLGLFNFSDLPLRLQADHLTVVGERQRLQLEDGSKVLLN 119

Query: 218 SASALSVAFSEHERRVVLDAGEALFETAD--------DSRPFVVE----TAGARVQGNAA 265
           + SA S  F+E      L  GEA FE           D+ P +      T   R     A
Sbjct: 120 TDSAFSSTFNEQRHVARLYKGEAFFEVPGNRNLPLEIDAGPVMASVSDTTFAVRYLDGVA 179

Query: 266 TFSVQR----------DGHVVLARGEA-KVGEH--ELAVAADAGTQMAWQRGKLIFNGKP 312
              VQR          D HV L+ GE+ ++G +  +     DA T +AW +G+L+F  +P
Sbjct: 180 QVQVQRGDVDLRATRNDTHVRLSAGESIRIGPNGFDRPARLDANTDLAWVQGRLVFENRP 239

Query: 313 LGQVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVTYLPWLAV 372
           L QVL EL RY  G I+ S+ +LA + V+G + LD+P  ++R+L      ++   P L +
Sbjct: 240 LSQVLAELRRYYPGWIINSNEQLANVAVTGNYRLDQPLDVVRSLAHITSARLQEFPALVI 299

Query: 373 VH 374
           ++
Sbjct: 300 LN 301