Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 319 a.a., Fe2+-dicitrate sensor, membrane component from Pseudomonas fluorescens FW300-N2E2

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 74/225 (32%), Positives = 109/225 (48%), Gaps = 32/225 (14%)

Query: 172 VAASVVLLVAAVA----GW--QQAPILLADYHTAVGERQVITLTDGTRVTLNSASALSVA 225
           V  SV+LL +A      GW  Q    L  DY T VGER+   L DG+ + LN+ ++++V 
Sbjct: 81  VLRSVLLLTSASGLGWLGWRSQATQNLFCDYRTTVGERREFQLADGSTLLLNTDTSVNVR 140

Query: 226 FSEHERRVVLDAGEALFETADD--SRPFVVETAGARVQGNAATFSVQ---RDGHVVLARG 280
           F  ++RR+ L  GE L  TA D   RPF V T    V      F V+   R G V +   
Sbjct: 141 FDANQRRLELLRGEILVTTAVDPLRRPFKVATGPVEVLALGTRFIVRGQARGGEVAVLEK 200

Query: 281 EAKVGEHELAV--AADAGTQM------------------AWQRGKLIFNGKPLGQVLTEL 320
             +V    +      +AG ++                  AWQ+G +I   +PL  +L EL
Sbjct: 201 AVEVSLPAIGSRRRVEAGQRLDFNDRSLGTLRGNDVSVGAWQKGSIIAIDRPLAALLEEL 260

Query: 321 ERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVT 365
            RYR+G ++  D  +  ++VSGVF +D+ +  L  LE  + L+VT
Sbjct: 261 SRYRNG-VLRCDPAIGDLKVSGVFPVDDTDLALAALESGFSLRVT 304