Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 325 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score =  108 bits (269), Expect = 3e-28
 Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 36/243 (14%)

Query: 167 LKQAGVAASVVLLVAAVAGWQQAPIL---LADYHTAVGERQVITLTDGTRVTLNSASALS 223
           +++  +A +++L+V  + GW    +    +AD  T+ G+R+ +TL DG+ V +N  +AL+
Sbjct: 82  MRRLAMAMTILLVVGGLGGWHGPTLYQNAVADQVTSTGQRRTLTLPDGSTVDMNGDTALA 141

Query: 224 VAFSEHERRVVLDAGEALFE-TADDSRPFVVETAGARVQGNAATFSVQRDGH---VVLAR 279
           + + + ERRV +  GEA F+ T D   PFVV+      +     FSV+R+     V +  
Sbjct: 142 LDYRDGERRVRILRGEAWFQVTRDPDHPFVVDGGAGAARVLGTQFSVRRENDRTTVTVGE 201

Query: 280 GEAKVGEHELA----------------------------VAADAGTQMAWQRGKLIFNGK 311
           G  +V  H  A                             AAD     AW++G+++F  +
Sbjct: 202 GLVEVVAHRNADSSAPWPDSVRLHPGESAEADAHGVTGPRAADPAVAFAWRQGQIVFRQQ 261

Query: 312 PLGQVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVTYL-PWL 370
            L  V+T L R   GR+VL + + A   VS VF LD P+A+L  LE+  G++ T + P+L
Sbjct: 262 SLASVITALNRQWPGRVVLLNDEAAERVVSAVFALDRPDAVLDALERGLGVRATRITPYL 321

Query: 371 AVV 373
            ++
Sbjct: 322 TLL 324