Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 168 a.a., RNA polymerase sigma 70 from Azospirillum brasilense Sp245

 Score =  107 bits (266), Expect = 3e-28
 Identities = 60/162 (37%), Positives = 97/162 (59%), Gaps = 3/162 (1%)

Query: 7   SGLLASFQEHYDDLLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVL-HARSFIFRV 65
           S LL    +HY+++   L RR+     A DV Q+TYL+L ++   A+P + + RS+++R+
Sbjct: 7   SSLLGLLIDHYEEMTGHLARRLGSLCLAEDVVQDTYLRLRSLT--ALPEIDNPRSYLYRM 64

Query: 66  AGNLAIDALRREQRIAASHDDSDGACEVACPAPAPEAALLARERLQILDQALLQLPDNAR 125
           A N+A+D +R E R       ++   +     P  EA L  ++RL+ L +AL +LP   R
Sbjct: 65  ADNIALDRMRAETRRGRRFAPAELGLDRPLDEPDAEATLEHKQRLERLSRALDELPPRCR 124

Query: 126 QALLLNRVEGLTQKQVAQRLGVSESMVAKYIGQALRHCRGRL 167
           +  LL++ +GL+   +A RLG+S SMV K++ +AL HCR RL
Sbjct: 125 EVFLLHKFDGLSHADIAARLGISRSMVEKHVMKALAHCRDRL 166