Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 331 a.a., Putative FecR (NCBI) from Rhodospirillum rubrum S1H

 Score =  101 bits (251), Expect = 3e-26
 Identities = 77/233 (33%), Positives = 107/233 (45%), Gaps = 27/233 (11%)

Query: 166 RLKQAGVAASVVLLVAAVAGWQQAPILLADYHTAVGERQVITLTDGTRVTLNSASALSVA 225
           RL    +AAS+ L + A+ G    P   ADY         I L DG+RV L++ SAL VA
Sbjct: 94  RLTAFALAASLALGIGALVGGPLWPG--ADYRAGAAGIAAIVLEDGSRVRLDAGSALDVA 151

Query: 226 FSEHERRVVLDAGEALFETADDS-RPFVVETAGARVQGNAATF-----------SVQRDG 273
           +    R V L  G A FE   D+ RPFVV      V      F           SV+  G
Sbjct: 152 YGPDRREVALRDGPAFFEVEPDTARPFVVRAGAVEVTVTGTAFAIDVSASEVGVSVEHGG 211

Query: 274 HVVLARGEAKV---GEHELAVAADAGTQM---------AWQRGKLIFNGKPLGQVLTELE 321
             V++ G + +   GE      AD               W+RG+L+   + L +V+  +E
Sbjct: 212 VRVVSAGRSALLAPGERMRIAKADGAVVRDRVPLSAIGPWRRGRLLVEDRALSEVVEAVE 271

Query: 322 RYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVTYL-PWLAVV 373
           R+  G I+L D  +A   V+GVFDL +PE  LR   +  G ++  L PWL +V
Sbjct: 272 RHFAGAIILGDGAMAERRVTGVFDLGDPERALRAAVEPLGGEIRRLGPWLLMV 324