Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 329 a.a., Putative FecR (NCBI) from Rhodospirillum rubrum S1H

 Score =  104 bits (259), Expect = 4e-27
 Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 31/230 (13%)

Query: 168 KQAGVAASVVLLVAAVAGWQQAPILLA---DYHTAVGERQVITLTDGTRVTLNSASALSV 224
           ++   AAS+ L++AA+  W+    ++A   DY TA GER+ +TL DG+ + LN+ASA+++
Sbjct: 95  RRLAFAASLALVLAAI--WRSPDAVVAWRADYLTATGERERVTLPDGSTMILNTASAVAL 152

Query: 225 AFSEHERRVVLDAGEALFETADDS-RPFVV--ETAGARVQGNAATFSVQRD-GHVVLARG 280
            F++ ER + L AGEA F+   D+  PF V       RV+G A +  ++ D   +VL RG
Sbjct: 153 DFAKGERAITLLAGEAFFDVRHDADHPFTVTGRFGEVRVEGTAFSVEMKDDRDEIVLERG 212

Query: 281 EAK---VGEHELAVAADAGT-------------------QMAWQRGKLIFNGKPLGQVLT 318
                 VG    A A   G                     +AW+ G++ F+ +PLG V+ 
Sbjct: 213 AVAVRCVGASGQAAALHPGEAVSVTATALSPVRRAAPEHDLAWRNGRIRFDERPLGAVVE 272

Query: 319 ELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVTYLP 368
           +L RY  G I + +       VSG + LD+    LRTL    G +V  LP
Sbjct: 273 DLRRYHKGPIFVLNDAAEGTVVSGNYRLDDIAGALRTLAAATGAEVIELP 322