Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 214 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score =  101 bits (252), Expect = 2e-26
 Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 4/159 (2%)

Query: 9   LLASFQEHYDDLLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARSFIFRVAGN 68
           L A F+ +   LL  LTR + DRQ A D+ QETYL++    E   P+ H  +F+ R A N
Sbjct: 39  LNAVFESYRRSLLGKLTRIVQDRQIAEDLTQETYLRVRRAAESG-PIDHIEAFLHRTARN 97

Query: 69  LAIDALRREQRIAASHDDS--DGACE-VACPAPAPEAALLARERLQILDQALLQLPDNAR 125
           LA+D LRR +R A     +  DGA + +A   P+ E AL+ R+ L +L +A+ +LP  AR
Sbjct: 98  LALDHLRRTKRRAGMGSSAVEDGAIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRAR 157

Query: 126 QALLLNRVEGLTQKQVAQRLGVSESMVAKYIGQALRHCR 164
             L L+RVE     ++A  LG+SE  V   +  AL HCR
Sbjct: 158 LVLTLSRVEDWPNTKIAAHLGISERTVFNDLKLALGHCR 196