Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 321 a.a., FecR family protein from Rhodopseudomonas palustris CGA009

 Score =  131 bits (330), Expect = 2e-35
 Identities = 86/228 (37%), Positives = 117/228 (51%), Gaps = 24/228 (10%)

Query: 161 RHCRGRLKQAGVAASVVLLVAAVAGWQQAPI-LLADYHTAVGERQVITLTDGTRVTLNSA 219
           R  R  L +   A +V+LLV A  GWQ  P+ L AD+ T VGER+ + L DG++V L ++
Sbjct: 71  RRQRSNLPKRIAATAVLLLVTAGFGWQLLPVGLFADHRTGVGERKTVMLQDGSQVELATS 130

Query: 220 SALSVAFSEHERRVVLDAGEALFETADD-SRPFVVETAGA--RVQGNAATFSVQRDGHVV 276
           +A+ V+F + ERR+ L  GEA F  A D  RPF+V   G   RV G A    + +D  V 
Sbjct: 131 TAIDVSFGDTERRIKLLTGEAFFTVAKDPGRPFIVTAEGGEVRVLGTAFDVKIAKDVSVA 190

Query: 277 LARGEAKVGE-----------HEL---------AVAADAGTQMAWQRGKLIFNGKPLGQV 316
           +A    +VG            HE+           AAD     AW+  +LIF   PL  V
Sbjct: 191 VAHNTVQVGTPAATPVKVEAGHEVRYGTGGVSGVTAADLDAVQAWRHNQLIFRDVPLDDV 250

Query: 317 LTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKV 364
           L +L RYR G IVL    L    V+ VFD D+ +A L T+ Q   L++
Sbjct: 251 LADLGRYRRGPIVLFGGALGKRHVTAVFDTDDVDAALDTIAQSLSLRI 298