Pairwise Alignments

Query, 960 a.a., putative Formate dehydrogenase, alpha subunit from Pseudomonas putida KT2440

Subject, 674 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  491 bits (1264), Expect = e-143
 Identities = 273/686 (39%), Positives = 389/686 (56%), Gaps = 26/686 (3%)

Query: 248 TTCAYCGVGCSFRAEIKGDQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDRITKPMIR 307
           T C YCG GC     +K   LV   P K    N G  C+KG +   +    DR+  P+IR
Sbjct: 8   TICPYCGTGCGVDLVVKDGTLVGTNPFKRHPVNEGKTCIKGSYCHEFVHRDDRLKTPLIR 67

Query: 308 KRLEDPWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQKLVRTAFG 367
           K  E    E SWDEA+   + + +     Y  + +G  +S+RCTNE+ Y+ QK  RT   
Sbjct: 68  KNGE--LVEASWDEALELISGKLQN----YSPEEVGFFSSARCTNEDNYVFQKFARTVIK 121

Query: 368 NNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVVLVIGANPTDAHPVFGSQLK 427
            NNVD CAR+ HS T  GL Q  G  A T S   +  AD + +IG+N  + HP+   ++ 
Sbjct: 122 TNNVDHCARL*HSATVVGLGQAFGSGAMTNSISDIEDADCIFIIGSNTFEQHPLIARRVV 181

Query: 428 RRLRQGARLIVIDPRRIDLVDSPHAR-ADLHLQLRPGTNVAMLNALAHVIVTEGLLAQSF 486
           R   +G ++IVIDPR      +P A+ ADL+LQL PGTN+A+LNA+ HV+V E L+ + F
Sbjct: 182 RAKEKGTKIIVIDPRY-----TPTAKQADLYLQLLPGTNIAVLNAIMHVLVKENLVDEEF 236

Query: 487 IDARCETGDFARWRDFVSLPDNAPEVLGPVCGVPAEQIRAAARLYATGGNAAIYYGLGVT 546
           I  R +  +  +     +L    PE    + GV  E I  AA++Y +   A+I Y +G+T
Sbjct: 237 IKNRTKGYEELK----TTLETYTPEYASKLSGVAPELIVEAAKMYGSANAASILYCMGIT 292

Query: 547 EHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSNE 606
           + + G   V    NLAM TGNIG+ G GVNPLRGQNNVQG+CDMG+ P+  PGY+ V   
Sbjct: 293 QFTTGVNNVKSCCNLAMITGNIGKPGTGVNPLRGQNNVQGACDMGALPNVFPGYQAVPAN 352

Query: 607 GVRAEFEQAWGVTLQPDPGLRIPNMFEAALDGSFKALYCQGEDIAQSDPNTQHVTAALLA 666
               ++ +AW   + P+ GL IP+M   A +   K +Y  GE+   SDP+  HV  AL +
Sbjct: 353 --HEKYAEAWNTCVDPNVGLSIPDMLAKAGE-QVKCIYVMGENPMVSDPDIHHVEHALKS 409

Query: 667 MECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVME-PLAGKADWEA 725
           ++ ++VQDIFL ETA+ A V LPG+S+ EKDGTF+N ERRI ++ K ++ P    ADW+ 
Sbjct: 410 LDLLIVQDIFLTETAQVADVVLPGASWAEKDGTFSNTERRIQKINKAVDSPGEAIADWKI 469

Query: 726 TVALANALGYP--MNYRHPSEIMDEIARLTPTFRRISYAELDRHGSLQWPCNDAAPDGTP 783
              LA  +G     N+    E+  EIA++TP +  ++Y  L   G L WPC      GTP
Sbjct: 470 VKMLAEKMGQGELFNFNTAEEVFQEIAKVTPQYAGVTYERLGVDG-LHWPCKTCEDPGTP 528

Query: 784 TMHIDQFVR--GKGRFMLTGYVPTDEKVNNRYPLLLTTGRILSQYNVGAQTRRTGNVAWH 841
            +H ++ +   G G      Y   DE  ++ YP+ LTTGRI+  Y+ G  TRR+ ++A  
Sbjct: 529 ILHCEKCLTPDGLGNIFAIDYADPDEMADSEYPMTLTTGRIIFHYHTGTMTRRSKHMADE 588

Query: 842 -DADRLEIHPTDAESRGIQDGDWVGIGSRAGQTVLRAKVSTRVAPGVVYTTFHFPESGAN 900
            +   +EIHP DAE  GI++   V + +R G+ V+ AK++  +  GVV+  FHF E+ AN
Sbjct: 589 INEGFVEIHPEDAEKMGIKNKQKVKVSTRRGEVVVNAKITPNIKQGVVFMPFHFAETAAN 648

Query: 901 VITTDNSDWATNCPEYKVTAVEVVKV 926
           ++T    D     PEYKV A +V K+
Sbjct: 649 ILTNPAQDPNCKIPEYKVCAAKVEKI 674