Pairwise Alignments

Query, 960 a.a., putative Formate dehydrogenase, alpha subunit from Pseudomonas putida KT2440

Subject, 676 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  476 bits (1224), Expect = e-138
 Identities = 276/688 (40%), Positives = 386/688 (56%), Gaps = 25/688 (3%)

Query: 246 VITTCAYCGVGCSFRAEIKGDQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDRITKPM 305
           V T C YCG GC     +K  ++V   P K    N G  C+KG + + +    DR+TKP+
Sbjct: 7   VHTICPYCGTGCGIDLVVKDGKVVDSHPFKRHPVNEGKVCIKGNYCYEFVHSEDRLTKPL 66

Query: 306 IRKRLEDPWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQKLVRTA 365
           I+K  E  + E +WDEA+   A + ++    Y  D +   + +R TNEE+Y +QK  RT 
Sbjct: 67  IKKNGE--FIEATWDEALDLIAGKLKQ----YSPDEVAFFSCARGTNEESYALQKFARTV 120

Query: 366 FGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVVLVIGANPTDAHPVFGSQ 425
              NNVD CAR+ H+PT  GL +  G  A T S   + QADV+L+ G+N  +AHP+    
Sbjct: 121 LKTNNVDHCARI*HAPTVVGLGECFGSGAMTNSITDLAQADVLLIYGSNTFEAHPLIARS 180

Query: 426 LKRRLRQGARLIVIDPRRIDLVDSPHARADLHLQLRPGTNVAMLNALAHVIVTEGLLAQS 485
           + +    G ++I IDPR           ADLHL+L PG+N+ ++N + ++I+ EG+  + 
Sbjct: 181 IVKAKENGTKIIAIDPRTTHTAKM----ADLHLKLIPGSNIDLINTITNIIIQEGMADEE 236

Query: 486 FIDARCETGDFARWRDFVSLPDNAPEVLGPVCGVPAEQIRAAARLYATGGNAAIYYGLGV 545
           FI  R E  D    +D VS      E    + G+PAE I  AAR+Y +  NA+I Y LGV
Sbjct: 237 FIKNRTEGYD--ELKDVVS--KYTLEKTAELSGIPAETILEAARMYGSAENASIMYCLGV 292

Query: 546 TEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSN 605
           TE++ G   V    NLAM TGN+GR G GVNPLRGQNNVQG+CDMG+ P+  PGY+ V  
Sbjct: 293 TEYTFGVDNVKSCCNLAMVTGNLGRPGTGVNPLRGQNNVQGACDMGALPNVFPGYQKVGE 352

Query: 606 EGVRAEFEQAWGVT-LQPDPGLRIPNMFEAALDGSFKALYCQGEDIAQSDPNTQHVTAAL 664
              R   E  W    L  + GL  P +   A +   K L+  GED   +D +  HV  AL
Sbjct: 353 AYER--LENLWETADLNREIGLTSPEVLHKAGE-QVKFLHIVGEDPMVADADINHVEKAL 409

Query: 665 LAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVME-PLAGKADW 723
            +++  VVQDIFL ETAK A V LP + + EKDGTFTN+ERR+ R+RK ++ P     DW
Sbjct: 410 KSLDFFVVQDIFLTETAKLADVVLPAACWAEKDGTFTNSERRVQRIRKAVDAPGDALPDW 469

Query: 724 EATVALANAL--GYPMNYRHPSEIMDEIARLTPTFRRISYAELDRHGSLQWPCNDAAPDG 781
                LA  +  G  +N+   SEI DE+A++ P +  +S+  L   G LQWPC      G
Sbjct: 470 LIVRKLAEKMGAGEKLNFESASEIFDEMAKVIPQYAGMSFERLGIDG-LQWPCKTPEDPG 528

Query: 782 TPTMHIDQFVR--GKGRFMLTGYVPTDEKVNNRYPLLLTTGRILSQYNVGAQTRRTGNVA 839
           TP +H ++F+R  G G+F    +   DE ++  YPL+LTTGRI+  YN G  TRR  ++ 
Sbjct: 529 TPILHKEKFLRPNGLGKFTPVEHKDADELIDEEYPLILTTGRIIFHYNSGTMTRRCDSIT 588

Query: 840 WH-DADRLEIHPTDAESRGIQDGDWVGIGSRAGQTVLRAKVSTRVAPGVVYTTFHFPESG 898
              D + +EI+  DA+  GI+ G+ V + SR G     A+V+  V  GVVY +FHF E  
Sbjct: 589 NEIDENFIEINTEDAKELGIKPGEKVRVSSRRGTVNADARVTENVIKGVVYMSFHFLEEA 648

Query: 899 ANVITTDNSDWATNCPEYKVTAVEVVKV 926
            N +T    D  +   E K+ AV+V K+
Sbjct: 649 TNKLTNSAYDPVSKTAELKICAVKVEKI 676