Pairwise Alignments

Query, 171 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 215 a.a., putative solute/DNA competence effector (RefSeq) from Shewanella loihica PV-4

 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 51  LQKHFPLAFPVNPAPKVPLKEGIFKD-AEQHLELLGLTREQLKLGISTWCRGARYWASMV 109
           L + FPL F      K PLK G+F+D AE+  +   +++ QL++ +  +    RY   + 
Sbjct: 18  LYETFPLCFIAEGETK-PLKIGLFQDLAERLADDSKVSKTQLRIALRRYTSSWRYLKGVK 76

Query: 110 ENAPRLDLNGQAAGTVTAAQALHAKQQAARQRSQDRRNRAKSKAQAQAPAPAAD 163
             A R+DL+G   G +      HA  QA  + SQ+   +AK+K  A+A A   D
Sbjct: 77  AGAQRVDLDGNECGELEQEHIDHA--QATLKESQE---KAKAKRAAKAAAEKTD 125



 Score = 23.9 bits (50), Expect = 0.002
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 14  RAEKGQVKAESAKPPKRKSPPQAKPREMDPA 44
           +A K  +   S+KP  + + PQ + +++ PA
Sbjct: 134 KAFKKPLPKRSSKPASKAAKPQVEAKDLSPA 164