Pairwise Alignments

Query, 309 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 310 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

 Score =  142 bits (358), Expect = 1e-38
 Identities = 104/304 (34%), Positives = 150/304 (49%), Gaps = 20/304 (6%)

Query: 23  LNALRVFEVVARHLNFRLAAEELGVTQAAVAQQIRGLEASLNLRLFERLPRG---LALTD 79
           LNALR FE  ARH +F  AA EL VT AAV QQ+R LE+ L + LF R   G   L LTD
Sbjct: 7   LNALRAFEAAARHQSFSAAAAELNVTPAAVGQQVRNLESWLGISLFTRASSGTARLMLTD 66

Query: 80  AGLGYSGSIRNALAMIDEATRLLRPQASH--LTVSVTPTFASKWLIPRLGSFAHSHPDID 137
                   IR     +      L+  + H  LTV+V+P FASKWL+PR+  F   HPD+D
Sbjct: 67  VARVALPDIREGFDRLSIGLARLKDASVHAGLTVTVSPAFASKWLLPRIERFQQDHPDLD 126

Query: 138 LRVLATDRLSHFNTDGVNLAVRYGKPDIGAGLNSELLMEQRIVAVASPTLFEASKTPTSF 197
           + +    R   F  + +++ VRYG      GL +  LM++ +  V +P            
Sbjct: 127 VLLDTNARSVDFQVERIDVGVRYGAGK-WPGLIAVHLMDEVMFPVCAPDFPLLKDGKLIA 185

Query: 198 EQLQAFTLLHDA-------HDFWPRFLAQVFPQHGQATARNLRFNQTSLAIDAAISGQGI 250
           E L   TL+HD        +  W  +L      H ++    LR N ++  + AAI GQG+
Sbjct: 186 EALADCTLIHDLSMANDRDYPTWRMWLDASGFTHIKSD-HGLRINNSASVLQAAIDGQGL 244

Query: 251 ALASLAFVSDDIVAGRLTQVFAQQ---LRLDKSFYLVWPRKLQQPESLGIVQRWF---KQ 304
           ALA    V DD+  GRL + FA +     L +++Y+V+  +  +   +   + W     +
Sbjct: 245 ALARSVMVRDDLSTGRLIRPFADKGLDCPLTQAYYVVYRAECSELPKIQAFRDWLIAEAE 304

Query: 305 QAGN 308
           QAG+
Sbjct: 305 QAGS 308