Pairwise Alignments

Query, 309 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  174 bits (440), Expect = 3e-48
 Identities = 110/295 (37%), Positives = 159/295 (53%), Gaps = 15/295 (5%)

Query: 20  LPSLNALRVFEVVARHLNFRLAAEELGVTQAAVAQQIRGLEASLNLRLFERLPRGLALTD 79
           LP LN+L+VFE  ARHL+F  AAEEL VTQAAV+ QI+ LE  L L+LF R  R L LT+
Sbjct: 5   LPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLLTE 64

Query: 80  AGLGYSGSIRNALAMIDEATRLL--RPQASHLTVSVTPTFASKWLIPRLGSFAHSHPDID 137
            G  Y   I++  + + EAT  L  R +   LT+S+ P+FA +WL+PRL  F    PDID
Sbjct: 65  EGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPDID 124

Query: 138 LRVLATDRLSHFNTDGVNLAVRYGKPDIGAGLNSELLMEQRIVAVASPTLFEASKTPTSF 197
           +R+ A D      TD V++A+ YG+     GL ++ L ++ ++ + SP L   +K     
Sbjct: 125 VRIKAVDMDEGSLTDDVDVAIYYGRGS-WPGLRADKLYQEFLIPLCSPALLLGNKPMEKL 183

Query: 198 EQLQAFTLLHD-AHDFWPRF-----LAQVFPQHGQATARNLRFNQTSLAIDAAISGQGIA 251
             L   TLLHD +   W +F     L  V   HG        F+ +++ + AA  GQG+A
Sbjct: 184 SDLAYHTLLHDTSRKDWKQFAKENGLDNVNVNHGPI------FSHSTMVLQAAAHGQGVA 237

Query: 252 LASLAFVSDDIVAGRLTQVFAQQLRLDKSFYLVWPRKLQQPESLGIVQRWFKQQA 306
           L +      +I AGRL   F + L  + +FY+V   K      +   + W  ++A
Sbjct: 238 LGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKA 292