Pairwise Alignments

Query, 289 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 278 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 8   PSYMKRFETVLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRYVQLMRLR 67
           P+Y  R   V+  +++ L  D S+  L+R A  S +HF R F    G+  S+Y   +R+ 
Sbjct: 175 PAYKLR--RVVEEMNAQLADDFSLTRLARSAELSEYHFSRMFKRATGLSPSQYFIGLRMA 232

Query: 68  RAAHQLVASPAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKA 114
           R A QL+      +++     G+ SP  F++ F+R  G+ PS + +A
Sbjct: 233 R-ARQLLIETQRSVIDIGLEVGYSSPSHFSQVFRREVGVTPSAYRQA 278