Pairwise Alignments

Query, 289 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 289 a.a., right oriC-binding transcriptional activator from Klebsiella michiganensis M5al

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 16/284 (5%)

Query: 17  VLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRYVQLMRLRRAAHQLVAS 76
           +L++++ HL+  LS++ ++  A +S +H  R F    G  +  Y++  RL ++A  L  +
Sbjct: 10  LLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLT 69

Query: 77  PAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKAPNWQAWS-------AVFNVPQR 129
            A PIL+ A    F+S + F RAFK+ F + P+++ ++P+W ++          F +P  
Sbjct: 70  -ARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRRSPDWSSYGMRPPLRLGEFTMPHY 128

Query: 130 SRSITMQIRIVNFAETHVAALEHQGPPGLVSESVARFRQWRMHSGQSPVASSRTFGIPYD 189
                   ++V   +++   LE          +  R + WR     +P      +G+   
Sbjct: 129 EFVTLNTTQLVGVTQSYTCKLEEISD----FRNQMRVQFWREFLANTPSIPPTLYGLHEP 184

Query: 190 NPDTTPAHAFR-FAVCGEIDEAVQPNDFGVHERVIPAGRCAVIRHTGSPDYIGETIYPLY 248
            P          F       E    +    H   +  G   +  + G    + E I  +Y
Sbjct: 185 RPSLDKDDEQEVFYTTALTPELANGHLHNAHPVTLEGGEYVMFTYEGLGTGLQEFILTVY 244

Query: 249 RDWLPSSNEELR---DHPLFFHYLSVYPETPLEQWQTDIYVPLK 289
              +P  N   R   D   FF       + P  Q + +  +P++
Sbjct: 245 GTCMPMLNLTRRKGLDIERFFPEDESRNQEPPIQLRCEYLIPIR 288