Pairwise Alignments

Query, 289 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 296 a.a., AraC-family transcriptional regulator from Caulobacter crescentus NA1000

 Score =  221 bits (562), Expect = 2e-62
 Identities = 117/285 (41%), Positives = 168/285 (58%), Gaps = 7/285 (2%)

Query: 9   SYMKRFETVLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRYVQLMRLRR 68
           +Y  R   VL +ID+HL+ DLSV  L+ +A FS  HF RQF+   G+ V+ YVQL R++R
Sbjct: 10  NYHARMRRVLDHIDAHLDEDLSVEVLAAVAAFSRHHFQRQFSGLYGIGVAAYVQLARMKR 69

Query: 69  AAHQLVASPAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKAPNWQAWSAVFNVPQ 128
           A+++L       +L  A  +G+E PEAF+RAF+R F  +PS F +AP W+ W A  +   
Sbjct: 70  ASYRLAFRDQDGVLGIALDSGYEGPEAFSRAFRRLFDQSPSSFRRAPRWEPWHAAQSPLV 129

Query: 129 RSRSITM-----QIRIVNFAETHVAALEHQGPPGLVSESVARFRQWRMHSGQSPVASSRT 183
           ++R  TM      +RIV+F +T VA + H+G P L+ +++ RF  WR  +G  P  S+ T
Sbjct: 130 QARRQTMTFTDDDVRIVDFPDTPVAVMRHEGDPALLGDTIRRFIAWRRAAGLPPRVSA-T 188

Query: 184 FGIPYDNPDTTPAHAFRFAVCGEIDEAVQPNDFGVHERVIPAGRCAVIRHTGSPDYIGET 243
           F + +D+PD TPA  +R  +C      V  N  GV   VIP G CAV+R  GS D +   
Sbjct: 189 FNVFHDDPDDTPAEQYRLDLCA-ATARVASNPDGVTSGVIPGGPCAVLRQIGSSDDLRAA 247

Query: 244 IYPLYRDWLPSSNEELRDHPLFFHYLSVYPETPLEQWQTDIYVPL 288
              LY +WLP S  ELRD P F   +S +P+ P  +  TD+++PL
Sbjct: 248 SRFLYGEWLPRSGRELRDAPFFAQRVSFFPDVPEHEAVTDLFLPL 292