Pairwise Alignments

Query, 336 a.a., tRNA-dihydrouridine synthase A from Pseudomonas putida KT2440

Subject, 337 a.a., putative TIM-barrel protein, nifR3 family from Pseudomonas stutzeri RCH2

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 32/302 (10%)

Query: 22  VAPMMDWTDRHCRFFLRLLSRQTLLYTEMVTTGALLHNDAHRFLR--HDASEHPLALQLG 79
           +APM   TD+  R   R      L+ +EM+T+   L N     LR  H     P ++Q+ 
Sbjct: 17  LAPMAGVTDQPFRQLCRRFGA-ALVVSEMLTSDMRLWNSRKSRLRMPHADEPEPRSVQIA 75

Query: 80  GSVPADLAACARLAEEAGYDEVNLNVGCPSDRVQNNMIGACLMAHPALVADCVKAMRDAV 139
           G  P  LA  AR   E G   +++N+GCP+ +V N   G+ LM    LV + + A+  AV
Sbjct: 76  GGDPQMLADAARRNVELGAQIIDINMGCPAKKVCNKAAGSALMRDERLVGEILDAVVGAV 135

Query: 140 STPVTVKHRIGINGRDSYAELSDFVGQVREAGCRSFTVHARIAILEGLSPKENREIPPLR 199
             PVT+K R G + ++        + +  +AG  +  VH R         + +       
Sbjct: 136 DVPVTLKIRTGWDRQNKNGLTVARIAE--QAGIAALAVHGR--------TRADLYTGEAE 185

Query: 200 YDIAAQLKRDFPDLEIVLNGGIKTLDECQAHLET--FDGVMLGREAYHNPYLLAEVDQQL 257
           YD  A +K+    + +  NG I +  +    L     DG+++GR A   P++  EV+  L
Sbjct: 186 YDTIAAIKQAV-SIPVFANGDIDSPQKAAQVLRATGVDGLLIGRAAQGRPWIFREVEHYL 244

Query: 258 FGSDAPVVSRSEALAQLRPYIVAHMESGGAMHHVTRHILGLAQGFK----------GARR 307
              +   +  +  L ++   ++ H++   A+H     ++G+    K          GAR 
Sbjct: 245 RTGE---LLAAPTLEEIEDTLLEHVQ---ALHEFYGEVMGVRIARKHVGWYLATLPGARD 298

Query: 308 FR 309
           FR
Sbjct: 299 FR 300