Pairwise Alignments

Query, 336 a.a., tRNA-dihydrouridine synthase A from Pseudomonas putida KT2440

Subject, 334 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 from Synechococcus elongatus PCC 7942

 Score =  107 bits (268), Expect = 3e-28
 Identities = 86/269 (31%), Positives = 132/269 (49%), Gaps = 20/269 (7%)

Query: 23  APMMDWTDRHCRFFLRLLSRQTLLYTEMVTTGA-LLHNDAHRFLRHDASEHPLALQLGGS 81
           +P+   +DR  R  +R  + Q+L++ EM   G  L   D   FL H   E P+  QL G 
Sbjct: 33  SPLAGVSDRSFRQLVRRSAPQSLIFAEMAHAGLQLAGRDRWEFLPH---EQPIGAQLFGD 89

Query: 82  VPADLAACARLAEEAGYDEVNLNVGCPSDRVQNNMIGACLMAHPALVADCVKAMRDAVST 141
            PA LAA A+ AE AG   ++LN+GCP  +V     G+ L+  P L    V+A+  AVS 
Sbjct: 90  QPATLAAAAQQAEAAGAVCIDLNMGCPVSKVTRKRGGSALLREPELAIAIVQAVAAAVSI 149

Query: 142 PVTVKHRIGINGRDSYAELSDFVGQVREAGCRSFTVHARIAILEGLSPKENREIPPLRYD 201
           PVTVK R+G         + DF  Q+  AG +  T+H R +  +G S + +       ++
Sbjct: 150 PVTVKTRLGW----EQVTILDFAQQLEAAGAQLLTLHGR-SRSQGYSGQAD-------WN 197

Query: 202 IAAQLKRDFPDLEIVLNGGIKTLDECQAHLET--FDGVMLGREAYHNPYLLAEVDQQL-F 258
              ++K     + ++ NG I +  +  A L+    DGVM GR +  NP L+  +D+ L  
Sbjct: 198 WITRVKSRL-SIPVIANGDINSPADAIACLQQTGADGVMCGRGSLGNPGLVGAIDRSLKT 256

Query: 259 GSDAPVVSRSEALAQLRPYIVAHMESGGA 287
           G   P +   + L   R +++   E  GA
Sbjct: 257 GEQTPELELRDRLQLAREHLLLLWEDKGA 285