Pairwise Alignments

Query, 450 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis JJ

 Score =  108 bits (270), Expect = 5e-28
 Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 34/318 (10%)

Query: 151 LQGMQRLIWLTVGLSALITALLGAWAARSGL-RPLRQMGQVAASVSARSLTTRLPVAQMP 209
           LQ   R     VGL  L+ AL+ ++    G+ +PL Q+ Q A  VS      ++ +    
Sbjct: 310 LQANVRNQTFVVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKV-IVDSD 368

Query: 210 EELAELASSMNAMLQRLDDAFQRL---------------------SAFSADIAHELRTPL 248
           +E  ELA + N M  +++ + ++L                     S   A ++HELRTPL
Sbjct: 369 DEFGELAKAFNKMATQINISDEKLKKHAEELKTSYNELKELDKLKSELIAIVSHELRTPL 428

Query: 249 SNLLTHTQVTL--TRPRSLEEYREALHGNLEELQWMAQMINDMLFLAKADHGLLVPGDAP 306
           +++  + ++ L  T     +  ++ L    + +  + ++I  ML L+K + G L      
Sbjct: 429 TSIKGYVELVLDGTMGTINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREK 488

Query: 307 LALHDEVDALLEYYAPLAEDSDVQMLREGEAV-LHGDQHMLRRALSNLLDNAMRFTPAGG 365
           + L   V  ++EY  PLA + ++++ +E E + +  D+  + + L+NL++NA++F+PA  
Sbjct: 489 VNLRAIVCDVIEYLKPLATEKNIKLNKEVEDIAIEADKDRITQVLTNLIENAIKFSPANE 548

Query: 366 QIKVT---LGPGPTINVANTGLAIDPAALPRLFDRFYRVDPA--RREGSSEHAGLGLAIT 420
            I V+         + V + G  I    + ++F+RFY+VD +  R++G S   GLGLA+ 
Sbjct: 549 SILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGS---GLGLAVC 605

Query: 421 RSIVQAHGGCIRAECEGG 438
           +SIV+AH G I  E E G
Sbjct: 606 KSIVEAHKGSIWVESELG 623