Pairwise Alignments

Query, 413 a.a., Lipoprotein releasing system, permease protein from Pseudomonas putida KT2440

Subject, 416 a.a., lipoprotein releasing system transmembrane protein LolC, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  311 bits (796), Expect = 3e-89
 Identities = 163/412 (39%), Positives = 253/412 (61%), Gaps = 4/412 (0%)

Query: 4   PLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRILGLV 63
           PL + IG R+ RA++ N FISFIS  S  G++LGV  +I+VLS MNGF+RE+  R+LG++
Sbjct: 4   PLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEQRLLGVI 63

Query: 64  PHAAILGV-QPVDDWHKVADAAMKNPAVMAVAPITEMEGMLSYKGAMQPIQVGGIDPAEE 122
             A ++GV +P+ DW  V   A++   + A AP   M+G++   G  Q + V GIDP +E
Sbjct: 64  SQADVVGVNEPIADWRAVEQTALQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDPEQE 123

Query: 123 GKVSIVGQHIVQGRLQGLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI--T 180
            KVS + Q +     Q L   +  +V+GE   ++  L  GD L L V ++  E  G    
Sbjct: 124 AKVSTLSQFMSPETWQSLSEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGSLRA 183

Query: 181 PRMQRLTVVGIFKVGAELDGSQAYIHVADAAEMQRWAPGQVQGVRLKLHDLYAAPQVSKA 240
            +  R  V G++++G EL+ + AYI +  AA +     G V GVR+ +  ++ AP   + 
Sbjct: 184 AKSHRFVVSGVYRLGGELELTTAYIPMRYAANILNLHQG-VTGVRISVTQVFEAPAKIRE 242

Query: 241 IAAGLGDAYRADDWSHTQGSLFSAMKMEKTMIGLLLMMIIAVAAFNIIATLVMVVNDKGP 300
           +   L  +    DW+ TQG L+  +++ +T++ L+L+++I VA FNI++TLVM V DK  
Sbjct: 243 LGYALNQSVYISDWTRTQGHLYQDIQLVRTIMYLVLVLVIGVACFNIVSTLVMAVRDKAS 302

Query: 301 DIAILRTLGATPAQIMGTFMVQGSLIGIVGTLIGGVLGVIAAFNVSQIVGWLERVSGQHI 360
           +IAIL T+G +   +MG FMVQG+L G+VG  +GGV+G+  A N+S I   +E++ G  +
Sbjct: 303 EIAILMTMGLSRLSVMGIFMVQGALNGLVGCALGGVIGIATAINLSAIARDIEQLLGIQL 362

Query: 361 FTSDVYFVSSLPSQLQWGDVAIICTAGLVMSFLATIYPAYRASQVQPAIGLA 412
            ++DVYFV  LPS+L   DV+++     VMS +AT+YPA++AS++ PA  LA
Sbjct: 363 LSADVYFVDFLPSELHMADVSLVIATAFVMSLIATLYPAWKASRIGPAQALA 414