Pairwise Alignments

Query, 416 a.a., LolC from Pseudomonas putida KT2440

Subject, 416 a.a., lipoprotein releasing system transmembrane protein LolC, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  310 bits (793), Expect = 7e-89
 Identities = 173/416 (41%), Positives = 256/416 (61%), Gaps = 12/416 (2%)

Query: 4   PLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVLGMI 63
           PL   IG R+ RA++ N F+SFIS  S  G+ALGV V+I+VLS MNGF+ E+  R+LG+I
Sbjct: 4   PLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEQRLLGVI 63

Query: 64  PHATLES-GQPIADWQALAQQVKQNPQVVAVAPFTQMQGLLTHDGKVQKVLLNGIDPARE 122
             A +    +PIADW+A+ Q   Q   + A APF +MQGL+   G  Q + + GIDP +E
Sbjct: 64  SQADVVGVNEPIADWRAVEQTALQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDPEQE 123

Query: 123 REVSIIDNFVLQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVSVTPAGMFPR 182
            +VS +  F+       L+  +  I++G+    KLG+ +GD L     ++    AG    
Sbjct: 124 AKVSTLSQFMSPETWQSLSEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGSLRA 183

Query: 183 MK--RFTVVGTFHVGAGEID---GYLGLTNISDLSRLHRWKPDQVQGLRLKFDDLFQAPR 237
            K  RF V G + +G GE++    Y+ +   +++  LH+     V G+R+    +F+AP 
Sbjct: 184 AKSHRFVVSGVYRLG-GELELTTAYIPMRYAANILNLHQG----VTGVRISVTQVFEAPA 238

Query: 238 VAWSIAQQLGDQEFYSRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVV 297
               +   L +Q  Y  DWTRT G+LYQ I++ + ++ L+L+L++ VA FNI+STLVM V
Sbjct: 239 KIRELGYAL-NQSVYISDWTRTQGHLYQDIQLVRTIMYLVLVLVIGVACFNIVSTLVMAV 297

Query: 298 NDKRGDIAILRTLGATPGQIMLIFMVQGTVIGVIGTLIGAVVGIFAALNVSAAIAGIETL 357
            DK  +IAIL T+G +   +M IFMVQG + G++G  +G V+GI  A+N+SA    IE L
Sbjct: 298 RDKASEIAILMTMGLSRLSVMGIFMVQGALNGLVGCALGGVIGIATAINLSAIARDIEQL 357

Query: 358 IGHKFLNADVYFIDYLPSQILAQDVYMVCGAALVLSFFATLYPAWRAARTQPAEAL 413
           +G + L+ADVYF+D+LPS++   DV +V   A V+S  ATLYPAW+A+R  PA+AL
Sbjct: 358 LGIQLLSADVYFVDFLPSELHMADVSLVIATAFVMSLIATLYPAWKASRIGPAQAL 413