Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Pseudomonas putida KT2440

Subject, 691 a.a., ATP-dependent DNA helicase RecG (EC 3.6.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  240 bits (612), Expect = 3e-67
 Identities = 155/391 (39%), Positives = 222/391 (56%), Gaps = 19/391 (4%)

Query: 593 ATFSAGFPFEETPDQQAAIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHSGR 652
           A + A   F  T  QQ     +  D+  P+PM RL+ GDVG GKT VA  AA  A+ +G 
Sbjct: 259 ARYLANLGFTPTGAQQRVGNEIAYDLSQPEPMLRLIQGDVGAGKTVVAALAALQALEAGY 318

Query: 653 QVAVLVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVAAAAADLAEGKIDILIGT 712
           QVA++ PT +LA+QH+ +F+       + V  ++     K  AAA A +AEG   +++GT
Sbjct: 319 QVALMAPTEILAEQHFITFQRWLEPLGIEVAWLAGKLKGKNRAAALAQIAEGA-PMVVGT 377

Query: 713 HKLLQDDVRFKDLGLAIIDEEHRFGVRQKEQLKAL----RSEVDILTLTATPIPRTLNMA 768
           H L QD+V+FK+L L IIDE+HRFGV+Q+  L+      R     L +TATPIPRTL M+
Sbjct: 378 HALFQDEVQFKNLALVIIDEQHRFGVQQRLALRQKGVGGRMCPHQLIMTATPIPRTLAMS 437

Query: 769 VAGMRDLSIIATPPARRLSVRT-FVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEK- 826
                D SI+   P  R  V T  V +  +  V E +      G Q Y++   ++  E+ 
Sbjct: 438 AYADLDTSILDELPPGRTPVNTVLVTDTRRVEVIERVRSACAEGRQAYWVCTLIEESEEL 497

Query: 827 -CAA------DLAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLVASTIIETGIDV 879
            C A      DL   + E ++G+ HG+M+  E   VM++F      +LVA+T+IE G+DV
Sbjct: 498 TCQAAETTFEDLTAALGELKVGLIHGRMKPAEKAAVMAEFKAGALQLLVATTVIEVGVDV 557

Query: 880 PSANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPTRQKVSADAEKRLEAIANTQ 939
           P+A+ ++IE  ++ GLAQLHQLRGRVGR    ++  LL      +S    +RL  +  T 
Sbjct: 558 PNASLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLL--YHPPLSQIGRQRLGIMRETN 615

Query: 940 DLGAGFVLATNDLEIRGAGELLGEGQSGQIQ 970
           D   GFV+A  DLE+RG GE+LG  Q+G +Q
Sbjct: 616 D---GFVIAEKDLELRGPGEMLGTRQTGLLQ 643