Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Pseudomonas putida KT2440

Subject, 817 a.a., ATP-dependent DNA helicase RecG from Synechococcus elongatus PCC 7942

 Score =  260 bits (665), Expect = 3e-73
 Identities = 161/442 (36%), Positives = 258/442 (58%), Gaps = 18/442 (4%)

Query: 538 DDALAPLHRLGS-EAWQKAKRKAA-EQVRDVAAELLDIYARRAARKGYAFADPSADYAT- 594
           + A+A +H   + E  Q+A+R+   ++   +   LL   AR+ A    A   P+ +    
Sbjct: 325 NQAIAAIHFPETPELLQQARRRLVFDEFLYLQLGLLQRRARQRAAAAAAVLAPTGELIDR 384

Query: 595 FSAGFPFEETPDQQAAIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHSGRQV 654
           F    PF+ T  QQ  +  +  D+  P PM+RLV GDVG GKT VA+ +   A+ +G Q 
Sbjct: 385 FYQLLPFQLTGAQQRVVNDILTDLQQPWPMNRLVQGDVGSGKTVVAIVSLLAAIQAGYQG 444

Query: 655 AVLVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVAAAAADLAEGKIDILIGTHK 714
           A++ PT +LA+QHY    D      + VE+++    A +       LA G++ +L+GTH 
Sbjct: 445 ALMAPTEVLAEQHYRKLVDWCTQLHLPVELLTGSTRAAKRREIQRSLATGELPLLVGTHA 504

Query: 715 LLQDDVRFKDLGLAIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVAGMRD 774
           L+QD V F++LGL +IDE+HRFGV Q+ +L+       +LT+TATPIPRTL + + G  +
Sbjct: 505 LIQDPVDFQNLGLVVIDEQHRFGVAQRAKLQQKGVNPHVLTMTATPIPRTLALTLHGDLE 564

Query: 775 LS-IIATPPARRLSVRTFVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEKC------ 827
           +S I   PP R+    T +   ++    + + RE+ +G QVY +   V+  EK       
Sbjct: 565 VSQIDELPPGRQPIQTTALGPSDRHHAHDLMRREIAQGRQVYVVLPLVEESEKLDLRSAI 624

Query: 828 --AADLAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTI 885
                L+++ PE +IG+ HG+M   E +  ++ F  ++ ++LV++T++E G+DVP+A  +
Sbjct: 625 EEYQRLSQVFPEFQIGLLHGRMSSAEKDAAIAAFRDRQTDILVSTTVVEVGVDVPNATVM 684

Query: 886 VIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPTRQKVSADAEKRLEAIANTQDLGAGF 945
           +IE A++FGL+QLHQLRGRVGR   ++Y  L++ +R   S  A++RL+ +  +QD   GF
Sbjct: 685 LIEHAERFGLSQLHQLRGRVGRGAARSYCLLMSASR---SETAQQRLKVMEQSQD---GF 738

Query: 946 VLATNDLEIRGAGELLGEGQSG 967
            +A  DL +RG G++LG  QSG
Sbjct: 739 FIAEMDLRLRGPGQVLGTRQSG 760