Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Pseudomonas putida KT2440

Subject, 703 a.a., ATP-dependent DNA helicase RecG (NCBI) from Rhodospirillum rubrum S1H

 Score =  251 bits (642), Expect = 1e-70
 Identities = 177/466 (37%), Positives = 248/466 (53%), Gaps = 29/466 (6%)

Query: 566  VAAELLDIYARRAAR--KGYAFADPSADYATFSAGFPFEETPDQQAAIEAVRADMLAPKP 623
            +A +L  +  RRAAR  +G       A  A   A  PF  T  Q  ++  +  DM +P  
Sbjct: 233  LATQLALLLVRRAARTVRGRPIVGTGALRAKVLAALPFALTGAQSRSLAEIDGDMASPAR 292

Query: 624  MDRLVCGDVGFGKTEVAMRAAFIAVHSGRQVAVLVPTTLLAQQHYNSFRDRFADWPVTVE 683
            M RL+ GDVG GKT VA+     AV +G Q A++ PT +LA+QH  +     A   V + 
Sbjct: 293  MLRLLQGDVGSGKTVVALLTMLTAVEAGAQAALMAPTEILARQHIETLAPLCASAGVRLG 352

Query: 684  VMSRFKSAKEVAAAAADLAEGKIDILIGTHKLLQDDVRFKDLGLAIIDEEHRFGVRQKEQ 743
            +++     +  AA    LA G+IDIL+GTH L QDDV F  L + ++DE+HRFGV Q+  
Sbjct: 353  LLTGRDKGRARAALLEALAAGEIDILVGTHALFQDDVVFAALAVVVVDEQHRFGVHQRLA 412

Query: 744  LKALRSEVDILTLTATPIPRTLNMAVAGMRDLSIIATPPARRLSVRTFVMEQNK-STVKE 802
            L      VD+L +TATPIPRTL +   G  D+S +   P  RL   T V+  ++   V  
Sbjct: 413  LSDKGRAVDVLVMTATPIPRTLTLTHYGDMDISRLDEKPPGRLPADTRVLPIDRLDDVIA 472

Query: 803  ALLRELLRGGQVYY---LHNDVKTIEKCAA-DLAELVPE-------ARIGIGHGQMRERE 851
            A+ R +  G +VY+   L  D +T +  AA D   L+ +        R+G+ HG+M+  E
Sbjct: 473  AVARAIDGGAKVYWVCPLIEDSETGDMAAAVDRQALLADRLGPRLGPRVGLVHGRMKPGE 532

Query: 852  LEQVMSDFYHKRFNVLVASTIIETGIDVPSANTIVIERADKFGLAQLHQLRGRVGRSHHQ 911
             + VM  F     ++LVA+T+IE G++VPSA  +VIE A++FGLAQLHQLRGR+GR   +
Sbjct: 533  KDAVMEAFSGNGLDLLVATTVIEVGVNVPSATVMVIEHAERFGLAQLHQLRGRIGRGGGR 592

Query: 912  AYAYLLTPTRQKVSADAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGEGQSGQIQA 971
            +   LL      +   A  RLE +  T D   GF +A  DL +RGAGE+LG  QSG    
Sbjct: 593  STCLLL--YAPPLGETARARLETMRRTDD---GFEIAEEDLRLRGAGEVLGTRQSG---L 644

Query: 972  VGFTLYMEMLERAVKAIRK-------GTQPNLEQPLGGGPEINLRL 1010
              F L   +L   + AI +        T P+L  P G    + L L
Sbjct: 645  PVFRLIDPLLAEDLLAIARKQAEVIVETDPDLAGPHGAALRVLLYL 690