Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Pseudomonas putida KT2440

Subject, 693 a.a., DNA helicase RecG from Klebsiella michiganensis M5al

 Score =  249 bits (636), Expect = 5e-70
 Identities = 171/458 (37%), Positives = 241/458 (52%), Gaps = 34/458 (7%)

Query: 539 DALAPLHR----LGSEAWQKAKRKAAEQV--RDVAAELLDIYARRAARKGYAFADPSADY 592
           DAL  LHR    L     +  K  A  ++   ++ A  L + A RA  + Y     SA+ 
Sbjct: 196 DALRTLHRPPPTLQLSELESGKHPAQRRLILEELLAHNLSMLALRAGAQRYHALALSAND 255

Query: 593 AT---FSAGFPFEETPDQQAAIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVH 649
                  A  PF  T  Q      +  DM    PM RLV GDVG GKT VA  AA  A+ 
Sbjct: 256 TLKDKLLASLPFTPTGAQARVTAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIA 315

Query: 650 SGRQVAVLVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVAAAAADLAEGKIDIL 709
            G+QVA++ PT LLA+QH N+FR  F    V V  ++  +  K   A    +A G++ ++
Sbjct: 316 HGKQVALMAPTELLAEQHANNFRSWFEPLGVEVGWLAGKQKGKARQAQQQAIASGQVQMI 375

Query: 710 IGTHKLLQDDVRFKDLGLAIIDEEHRFGVRQKEQLKALRSEVDI----LTLTATPIPRTL 765
           +GTH + Q+ V+F  L L IIDE+HRFGV Q+  L     +       L +TATPIPRTL
Sbjct: 376 VGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTL 435

Query: 766 NMAVAGMRDLSIIATPPARRLSVRTFVMEQNKST-----VKEALLRELLRGGQVYYLHND 820
            M      D S+I   P  R  V T  +   + +     V+ A   E   G Q Y++   
Sbjct: 436 AMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRSDIIDRVRNACTHE---GRQAYWVCTL 492

Query: 821 VKTIEKCAADLAE--------LVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLVASTI 872
           ++  +   A  AE         +PE  IG+ HG+M+  E + VMS F     ++LVA+T+
Sbjct: 493 IEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKSAEKQAVMSAFKQGELHLLVATTV 552

Query: 873 IETGIDVPSANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPTRQKVSADAEKRL 932
           IE G+DVP+++ ++IE  ++ GLAQLHQLRGRVGR    ++  LL   +  +S  A+KRL
Sbjct: 553 IEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLL--YKSPLSKTAQKRL 610

Query: 933 EAIANTQDLGAGFVLATNDLEIRGAGELLGEGQSGQIQ 970
           + + ++ D   GFV+A  DLEIRG GELLG  Q+G  +
Sbjct: 611 QVLRDSND---GFVIAQKDLEIRGPGELLGTRQTGNAE 645