Pairwise Alignments

Query, 336 a.a., beta-N-acetylglucosaminidase from Pseudomonas putida KT2440

Subject, 342 a.a., beta-hexosaminidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  273 bits (697), Expect = 6e-78
 Identities = 148/280 (52%), Positives = 188/280 (67%), Gaps = 8/280 (2%)

Query: 9   LMVDIAGKWLTAEDRQLLRQPEVAGLIIFARNIDNPRQVRELCASIRAIRPDLILAVDQE 68
           LM+D+    ++  + ++LR P+V GLI+F+RN  +  Q+  L   IR IRP++++AVD E
Sbjct: 4   LMLDLLSLDVSEAEAEMLRHPQVGGLILFSRNFTSREQLIALVQQIRQIRPEILIAVDHE 63

Query: 69  GGRVQRLRQGFVRLPAM-----RALADNDNAEYLAEQCGWLMATEVLAVGLDLSFAPVLD 123
           GGRVQR R+GF  +PAM      A  D   A+  A + G+LMA E+LA  +DLSFAPVLD
Sbjct: 64  GGRVQRFREGFTLIPAMGDILPAAKGDMALAKRWACELGFLMAIELLACDIDLSFAPVLD 123

Query: 124 LDHQRSAVVGSRAFEGDPLLATRLAGAFIRGMNAAGMAACGKHFPGHGWAEADSHVAIPT 183
           L+   S V+G R+F  +P     LA +FI GM  AGM A GKHFPGHG   ADSH+A P 
Sbjct: 124 LNGI-SQVIGKRSFSANPDEVIALARSFIEGMAQAGMGAVGKHFPGHGSVAADSHIAQPI 182

Query: 184 DERSLEQLRQSDLVPFTRL--SGQLAAVMPAHVIYPQVDNQPAGFSRRWLQDILRGELGF 241
           DER  E +   D++PF  L  +G+L+ +MPAHVIYP+VD  PAGFS  WL+ ILR ELGF
Sbjct: 183 DEREGEVIFNQDILPFKELIFNGKLSGIMPAHVIYPKVDPNPAGFSSYWLKQILRKELGF 242

Query: 242 DGVIFSDDLSMAGAHVVGDAASRIEAALSAGCDMGLVCND 281
           +GVIFSDDL M GA   GD   R +AAL AGCDM LVCND
Sbjct: 243 NGVIFSDDLGMKGASFAGDYVGRAKAALDAGCDMILVCND 282