Pairwise Alignments

Query, 869 a.a., DNA topoisomerase I from Pseudomonas putida KT2440

Subject, 870 a.a., DNA topoisomerase I (EC 5.99.1.2) from Pseudomonas fluorescens FW300-N2E2

 Score = 1617 bits (4188), Expect = 0.0
 Identities = 795/870 (91%), Positives = 833/870 (95%), Gaps = 1/870 (0%)

Query: 1   MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAA-GE 59
           MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAA GE
Sbjct: 1   MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE 60

Query: 60  APALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD 119
           APALSPK+KAR+QLV+RMGVDP+HGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
Sbjct: 61  APALSPKDKARKQLVSRMGVDPEHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD 120

Query: 120 REGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDR 179
           REGEAIAWHLREAIGGDD+RYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDR
Sbjct: 121 REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDR 180

Query: 180 VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAK 239
           VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWE+HADLGTAK A 
Sbjct: 181 VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEVHADLGTAKGAT 240

Query: 240 VRFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAA 299
           VRF+VAREKGEAFKPLNEAQAMAALEKLKASSYS+VKRED+PTSSKPSAPFITSTLQQAA
Sbjct: 241 VRFDVAREKGEAFKPLNEAQAMAALEKLKASSYSIVKREDKPTSSKPSAPFITSTLQQAA 300

Query: 300 SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPEAPL 359
           SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADA+ MAR+YIE EFGK+YLP+ P 
Sbjct: 301 SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVAMARTYIESEFGKKYLPDTPN 360

Query: 360 VYGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSV 419
           VY SKEGAQEAHEAIRPSD NT P+KLSGMERDAERLYELIWRQFLACQM PAQYLST+V
Sbjct: 361 VYSSKEGAQEAHEAIRPSDANTEPSKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTV 420

Query: 420 TVAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKP 479
           +V AGDFELRAKGRILKFDGYTRV+PQ +KPG+DDVLP+M QG+ +KLI++DP+QHFTKP
Sbjct: 421 SVGAGDFELRAKGRILKFDGYTRVMPQITKPGDDDVLPDMAQGDVMKLIKLDPTQHFTKP 480

Query: 480 PARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSES 539
           PAR++EASLVKEMEKRGIGRPSTYAAIISTIQDRGYV LHNRRFYSEKMGDIVTERLSES
Sbjct: 481 PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLSES 540

Query: 540 FSNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESSEDGMRANQPTMT 599
           FSNLMDYGFTA MEENLDDVAQGERDWKNVLDEFYGDF KKL+ AES + GMRANQP MT
Sbjct: 541 FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAESPDSGMRANQPVMT 600

Query: 600 NIPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESRVL 659
           +IPC  CGRPM IRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESES VL
Sbjct: 601 DIPCLTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL 660

Query: 660 LGKHRCPICATAMDAYLLDEKHKLHICGNNPDCVGYEIEEGNYRIKGYEGPSLECDKCGS 719
            GKHRCPIC+TAMDAYLLDEK KLHICGNNPDC GYEIEEG YRIKGYEGPSLECDKCGS
Sbjct: 661 RGKHRCPICSTAMDAYLLDEKRKLHICGNNPDCAGYEIEEGTYRIKGYEGPSLECDKCGS 720

Query: 720 EMQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGA 779
           EMQLKTGRFGKFFGCTNP CKNTRKLLKSG+AAPPKMD V MPELKCEKV+DTY+LRDGA
Sbjct: 721 EMQLKTGRFGKFFGCTNPTCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA 780

Query: 780 SGLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPDGRPAVIRYSRKTK 839
           SGLFLAASQFPKNRETRAPLV+EIVPHK EIDPKYHFLC+APQKDPDGRPAVIRYSRKTK
Sbjct: 781 SGLFLAASQFPKNRETRAPLVMEIVPHKDEIDPKYHFLCEAPQKDPDGRPAVIRYSRKTK 840

Query: 840 EQYVQSEVDGKPTGWKAFYDGNAWKVEDKR 869
           EQYVQ+EVDGKPTGWKA+YDG  W VEDKR
Sbjct: 841 EQYVQTEVDGKPTGWKAYYDGGKWTVEDKR 870