Pairwise Alignments

Query, 869 a.a., DNA topoisomerase I from Pseudomonas putida KT2440

Subject, 870 a.a., DNA topoisomerase I from Pseudomonas syringae pv. syringae B728a

 Score = 1600 bits (4144), Expect = 0.0
 Identities = 785/870 (90%), Positives = 827/870 (95%), Gaps = 1/870 (0%)

Query: 1   MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAA-GE 59
           MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASA+K+PAAKRGKAA GE
Sbjct: 1   MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASAAKDPAAKRGKAAAGE 60

Query: 60  APALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD 119
            P L+PKEKA+RQLV+RMGVDP+HGWKAKYEILPGKEKVIEELR+LAKDAD IYLATDLD
Sbjct: 61  GPVLTPKEKAQRQLVSRMGVDPEHGWKAKYEILPGKEKVIEELRKLAKDADIIYLATDLD 120

Query: 120 REGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDR 179
           REGEAIAWHLREAIGGDD+RYKRVVFNEITKKAIQEAFS+PGELDI RVNAQQARRFLDR
Sbjct: 121 REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDIARVNAQQARRFLDR 180

Query: 180 VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAK 239
           VVGYMVSPLLW K+ARGLSAGRVQSVAVKLVVEREREIRAF PEEYWEIHADLGTAK A 
Sbjct: 181 VVGYMVSPLLWQKVARGLSAGRVQSVAVKLVVEREREIRAFNPEEYWEIHADLGTAKGAN 240

Query: 240 VRFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAA 299
           VRFEVARE GEAFKPLNE QAMAALEKLKASSYS+VKRED+PTSSKPSAPFITSTLQQAA
Sbjct: 241 VRFEVARENGEAFKPLNETQAMAALEKLKASSYSIVKREDKPTSSKPSAPFITSTLQQAA 300

Query: 300 SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPEAPL 359
           SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADA+ MAR YI  EFGK+YLPE+P 
Sbjct: 301 SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVSMARDYIGTEFGKKYLPESPN 360

Query: 360 VYGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSV 419
           VY SKEGAQEAHEAIRPSDVNTHP+KL+GMERDAERLYELIWRQF+ACQM PAQYLST+V
Sbjct: 361 VYSSKEGAQEAHEAIRPSDVNTHPSKLTGMERDAERLYELIWRQFVACQMLPAQYLSTTV 420

Query: 420 TVAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKP 479
           TVAA DFELRAKGRILKFDGYTR LPQ +KPG+DDVLP+M QGE LKL ++DPSQHFTKP
Sbjct: 421 TVAASDFELRAKGRILKFDGYTRALPQMAKPGDDDVLPDMAQGETLKLNKLDPSQHFTKP 480

Query: 480 PARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSES 539
           PAR++EASLVKEMEKRGIGRPSTYAAIISTIQDRGYV LHNRRFYSEKMGDIVT RLSES
Sbjct: 481 PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTGRLSES 540

Query: 540 FSNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESSEDGMRANQPTMT 599
           FSNLMDYGFTA MEENLDDVAQGERDWKNVLDEFYGDF KKL+ AE+++ GMRANQP MT
Sbjct: 541 FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFRKKLEVAEAADGGMRANQPVMT 600

Query: 600 NIPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESRVL 659
           +IPCK CGRPM IRTASTGVFLGCSGYSLPPKERCKATVNL PGDEIA DDEGESESRVL
Sbjct: 601 DIPCKVCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLTPGDEIADDDEGESESRVL 660

Query: 660 LGKHRCPICATAMDAYLLDEKHKLHICGNNPDCVGYEIEEGNYRIKGYEGPSLECDKCGS 719
            GKHRCPIC+TAMDAYLLDEKHKLHICGNNPDC GYEIEEG YRIKGYEGPSLECDKCGS
Sbjct: 661 RGKHRCPICSTAMDAYLLDEKHKLHICGNNPDCTGYEIEEGTYRIKGYEGPSLECDKCGS 720

Query: 720 EMQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGA 779
           EMQLKTGRFGKFFGCTNP CKNTRKLLKSG+AAPPKMD V MPELKC+KVDDTY+LRDGA
Sbjct: 721 EMQLKTGRFGKFFGCTNPDCKNTRKLLKSGDAAPPKMDPVKMPELKCDKVDDTYILRDGA 780

Query: 780 SGLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPDGRPAVIRYSRKTK 839
           SGLFLAASQFPKNRETRAPLV+EI PHK EIDPKYHFLC+AP+KDPDGRPAVIRYSRKTK
Sbjct: 781 SGLFLAASQFPKNRETRAPLVIEIAPHKDEIDPKYHFLCEAPKKDPDGRPAVIRYSRKTK 840

Query: 840 EQYVQSEVDGKPTGWKAFYDGNAWKVEDKR 869
           EQYVQ+EV+GKPTGW+AFYDG+AWKVEDKR
Sbjct: 841 EQYVQTEVEGKPTGWRAFYDGSAWKVEDKR 870